RNA–Protein interactions for RNA: ENST00000422221.1

CLIC4P3-201, Transcript of chloride intracellular channel 4 pseudogene 3, humanhuman

BASIC

Gene CLIC4P3, Length 752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P3-201ENST00000422221 MAP3K7O43318 606 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 SNRPA1P09661 255 aaKnown RBP10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 CTCFP49711 727 aaPredicted RBP10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 PPP4CP60510 307 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 CACNA1SQ13698 1873 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 PDIA6Q15084 440 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 EAPPQ56P03 285 aaPredicted RBP10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 TPTE2Q6XPS3 522 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 SYNE4Q8N205 404 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 HACL1Q9UJ83 578 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 NIP7Q9Y221 180 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 SCN4AP35499 1836 aa10.03□□□□□ -0.8
CLIC4P3-201ENST00000422221 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.8
CLIC4P3-201ENST00000422221 FAM177BA6PVY3 158 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 PRKAR2BP31323 418 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 EPHX2P34913 555 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 LBX1P52954 281 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 MAP1SQ66K74 1059 aaPredicted RBP10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 MCM10Q7L590 875 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 CNTROBQ8N137 903 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
CLIC4P3-201ENST00000422221 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 SNED1Q8TER0 1413 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 RASSF10A6NK89 507 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 IARSP41252 1262 aaKnown RBP10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 FMR1Q06787 632 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 DCTN1Q14203 1278 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 DEFB115Q30KQ5 88 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 RTKN2Q8IZC4 609 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 ADAMTSL1Q8N6G6 1762 aa10.01□□□□□ -0.81
CLIC4P3-201ENST00000422221 NRG2O14511 850 aaPredicted RBP10□□□□□ -0.81
CLIC4P3-201ENST00000422221 HSPA8P11142 646 aaKnown RBP10□□□□□ -0.81
CLIC4P3-201ENST00000422221 ALDH1B1P30837 517 aa10□□□□□ -0.81
CLIC4P3-201ENST00000422221 SLC51AQ86UW1 340 aa10□□□□□ -0.81
CLIC4P3-201ENST00000422221 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
CLIC4P3-201ENST00000422221 GPC2Q8N158 579 aa10□□□□□ -0.81
CLIC4P3-201ENST00000422221 MIS18AQ9NYP9 233 aa10□□□□□ -0.81
CLIC4P3-201ENST00000422221 ZNF652Q9Y2D9 606 aa10□□□□□ -0.81
CLIC4P3-201ENST00000422221 PRSS12P56730 875 aa9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 CRY2Q49AN0 593 aa9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 CCER1Q8TC90 406 aaPredicted RBP9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 AIDAQ96BJ3 306 aa9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 PSMD1Q99460 953 aa9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 WDR33Q9C0J8 1336 aaKnown RBP9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 COL4A5P29400 1685 aa9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
CLIC4P3-201ENST00000422221 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
CLIC4P3-201ENST00000422221 CST9Q5W186 159 aa9.98□□□□□ -0.81
CLIC4P3-201ENST00000422221 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
CLIC4P3-201ENST00000422221 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
CLIC4P3-201ENST00000422221 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLIC4P3-201ENST00000422221 HTATSF1O43719 755 aaKnown RBP9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 U2AF1L5P0DN76 240 aaPredicted RBP9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 HOXA10P31260 410 aaPredicted RBP9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 EPS15P42566 896 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 SCNN1DP51172 638 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 U2AF1Q01081 240 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 TTLL7Q6ZT98 887 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 NKX2-3Q8TAU0 364 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 ABHD8Q96I13 439 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 ABCC12Q96J65 1359 aa9.97□□□□□ -0.81
CLIC4P3-201ENST00000422221 ERVV-1B6SEH8 477 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 TRAF5O00463 557 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 GTF2E1P29083 439 aaPredicted RBP9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 PPP2R1AP30153 589 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 MAP2K1Q02750 393 aaPredicted RBP9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 SUSD4Q5VX71 490 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 JDP2Q8WYK2 163 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 TATDN2Q93075 761 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 ABT1Q9ULW3 272 aaKnown RBP9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 LTBP1Q14766 1721 aa9.96□□□□□ -0.82
CLIC4P3-201ENST00000422221 GPTP24298 496 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 EIF6P56537 245 aaKnown RBP9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 CC2D2BQ6DHV5 1058 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 CYP4F22Q6NT55 531 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 CAPNS2Q96L46 248 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 CFAP53Q96M91 514 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 NYXQ9GZU5 481 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 MAP3K15Q6ZN16 1313 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
CLIC4P3-201ENST00000422221 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
CLIC4P3-201ENST00000422221 EIF4A1P60842 406 aaKnown RBP9.94□□□□□ -0.82
CLIC4P3-201ENST00000422221 USP50Q70EL3 339 aaPredicted RBP9.94□□□□□ -0.82
CLIC4P3-201ENST00000422221 ZNF34Q8IZ26 560 aa9.94□□□□□ -0.82
CLIC4P3-201ENST00000422221 LARGE2Q8N3Y3 721 aa9.94□□□□□ -0.82
CLIC4P3-201ENST00000422221 GPR101Q96P66 508 aaPredicted RBP9.94□□□□□ -0.82
CLIC4P3-201ENST00000422221 CRAMP1Q96RY5 1269 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms