RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
LINC02539-202ENST00000419220 LAMB4A4D0S4 1761 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
LINC02539-202ENST00000419220 TJP1Q07157 1748 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 ELL2O00472 640 aaPredicted RBP8.58□□□□□ -1.04
LINC02539-202ENST00000419220 DGAT1O75907 488 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 ST5P78524 1137 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 RIC3Q7Z5B4 369 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 CD2APQ9Y5K6 639 aa8.58□□□□□ -1.04
LINC02539-202ENST00000419220 MYH14Q7Z406 1995 aaKnown RBP8.57□□□□□ -1.04
LINC02539-202ENST00000419220 GYS1P13807 737 aa8.57□□□□□ -1.04
LINC02539-202ENST00000419220 PARP10Q53GL7 1025 aa8.57□□□□□ -1.04
LINC02539-202ENST00000419220 PACS2Q86VP3 889 aa8.57□□□□□ -1.04
LINC02539-202ENST00000419220 TSR2Q969E8 191 aaKnown RBP8.57□□□□□ -1.04
LINC02539-202ENST00000419220 TMX4Q9H1E5 349 aaPredicted RBP8.57□□□□□ -1.04
LINC02539-202ENST00000419220 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 LRP5O75197 1615 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 MMP10P09238 476 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 PDE6BP35913 854 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 TGFB2P61812 414 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 MDM2Q00987 491 aaPredicted RBP8.56□□□□□ -1.04
LINC02539-202ENST00000419220 EXOSC9Q06265 439 aaKnown RBP8.56□□□□□ -1.04
LINC02539-202ENST00000419220 SLFN5Q08AF3 891 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 AIMP1Q12904 312 aaKnown RBP8.56□□□□□ -1.04
LINC02539-202ENST00000419220 MSL1Q68DK7 614 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 COPS6Q7L5N1 327 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 NBPF5PQ86XG9 351 aaPredicted RBP8.56□□□□□ -1.04
LINC02539-202ENST00000419220 PLBD2Q8NHP8 589 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 NECTIN2Q92692 538 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
LINC02539-202ENST00000419220 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 HDAC5Q9UQL6 1122 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 NIP7Q9Y221 180 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC02539-202ENST00000419220 CARMIL3Q8ND23 1372 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
LINC02539-202ENST00000419220 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 PRAMEF22A3QJZ6 481 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 IPO8O15397 1037 aaKnown RBP8.55□□□□□ -1.04
LINC02539-202ENST00000419220 ALDH1L2Q3SY69 923 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
LINC02539-202ENST00000419220 CNBD1Q8NA66 436 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 C8orf58Q8NAV2 365 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 CHPF2Q9P2E5 772 aa8.55□□□□□ -1.04
LINC02539-202ENST00000419220 TUBGCP6Q96RT7 1819 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 NBPF26B4DH59 902 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 H0YIN7 160 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 VAMP4O75379 141 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 CAMTA2O94983 1202 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 SERPINB2P05120 415 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 TM4SF1P30408 202 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 PRSS12P56730 875 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
LINC02539-202ENST00000419220 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 XAGE3Q8WTP9 111 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 CDCA7LQ96GN5 454 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 SRP68Q9UHB9 627 aaKnown RBP8.54□□□□□ -1.04
LINC02539-202ENST00000419220 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
LINC02539-202ENST00000419220 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 GRIN3BO60391 1043 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 MS4A1P11836 297 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
LINC02539-202ENST00000419220 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
LINC02539-202ENST00000419220 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
LINC02539-202ENST00000419220 ZBTB3Q9H5J0 574 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 PTPRCP08575 1304 aa8.53□□□□□ -1.04
LINC02539-202ENST00000419220 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
LINC02539-202ENST00000419220 PIP4K2AP48426 406 aaPredicted RBP8.52□□□□□ -1.05
LINC02539-202ENST00000419220 NFIXQ14938 502 aa8.52□□□□□ -1.05
LINC02539-202ENST00000419220 GPR162Q16538 588 aa8.52□□□□□ -1.05
LINC02539-202ENST00000419220 NLRP3Q96P20 1036 aa8.52□□□□□ -1.05
LINC02539-202ENST00000419220 SYT17Q9BSW7 474 aa8.52□□□□□ -1.05
LINC02539-202ENST00000419220 BRIP1Q9BX63 1249 aa8.52□□□□□ -1.05
LINC02539-202ENST00000419220 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
LINC02539-202ENST00000419220 PDGFDQ9GZP0 370 aaPredicted RBP8.52□□□□□ -1.05
LINC02539-202ENST00000419220 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 POLRMTO00411 1230 aaKnown RBP8.51□□□□□ -1.05
LINC02539-202ENST00000419220 FLIIQ13045 1269 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 TRIM28Q13263 835 aaKnown RBP8.51□□□□□ -1.05
LINC02539-202ENST00000419220 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 GRIPAP1Q4V328 841 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
LINC02539-202ENST00000419220 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 TBC1D9BQ66K14 1250 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 TSPYL6Q8N831 410 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.51□□□□□ -1.05
LINC02539-202ENST00000419220 CCDC191Q8NCU4 936 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 CHMP4BQ9H444 224 aaKnown RBP8.51□□□□□ -1.05
LINC02539-202ENST00000419220 SMC4Q9NTJ3 1288 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 PIM2Q9P1W9 311 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms