RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
RAB3IP-205ENST00000417413 CCDC171Q6TFL3 1326 aa23.21■■□□□ 1.31
RAB3IP-205ENST00000417413 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
RAB3IP-205ENST00000417413 RTL9Q8NET4 1388 aa23.21■■□□□ 1.31
RAB3IP-205ENST00000417413 KCNB2Q92953 911 aa23.21■■□□□ 1.31
RAB3IP-205ENST00000417413 SNX14Q9Y5W7 946 aa23.21■■□□□ 1.31
RAB3IP-205ENST00000417413 COL24A1Q17RW2 1714 aa23.2■■□□□ 1.3
RAB3IP-205ENST00000417413 KBTBD3Q8NAB2 608 aa23.2■■□□□ 1.3
RAB3IP-205ENST00000417413 CNNM1Q9NRU3 951 aa23.2■■□□□ 1.3
RAB3IP-205ENST00000417413 NARFQ9UHQ1 456 aa23.2■■□□□ 1.3
RAB3IP-205ENST00000417413 RTCBQ9Y3I0 505 aaKnown RBP23.2■■□□□ 1.3
RAB3IP-205ENST00000417413 ARAP2Q8WZ64 1704 aa23.2■■□□□ 1.3
RAB3IP-205ENST00000417413 APBA3O96018 575 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 HSP90B1P14625 803 aaKnown RBP23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 TICAM2Q86XR7 235 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 PAG1Q9NWQ8 432 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 GNPATO15228 680 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 ATP2B3Q16720 1220 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 RASEFQ8IZ41 740 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 IL27Q8NEV9 243 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 MAP4K1Q92918 833 aa23.19■■□□□ 1.3
RAB3IP-205ENST00000417413 AKAP11Q9UKA4 1901 aa23.18■■□□□ 1.3
RAB3IP-205ENST00000417413 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
RAB3IP-205ENST00000417413 CIZ1Q9ULV3 898 aaPredicted RBP23.18■■□□□ 1.3
RAB3IP-205ENST00000417413 ABCC12Q96J65 1359 aa23.17■■□□□ 1.3
RAB3IP-205ENST00000417413 GOLIM4O00461 696 aa23.17■■□□□ 1.3
RAB3IP-205ENST00000417413 FRAT2O75474 233 aaPredicted RBP23.17■■□□□ 1.3
RAB3IP-205ENST00000417413 CCDC158Q5M9N0 1113 aa23.17■■□□□ 1.3
RAB3IP-205ENST00000417413 USPL1Q5W0Q7 1092 aa23.17■■□□□ 1.3
RAB3IP-205ENST00000417413 PDE8BO95263 885 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 MCM2P49736 904 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 CCDC152Q4G0S7 254 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 TBC1D9BQ66K14 1250 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 ILDR1Q86SU0 546 aaPredicted RBP23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 ZNF589Q86UQ0 364 aaPredicted RBP23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 AMIGO3Q86WK7 504 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 SEC31BQ9NQW1 1179 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 MROH5Q6ZUA9 1318 aa23.16■■□□□ 1.3
RAB3IP-205ENST00000417413 CHGBP05060 677 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 HSP90AA1P07900 732 aaKnown RBP23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 ADRA2BP18089 450 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 ERFEQ4G0M1 354 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 TTC39AQ5SRH9 613 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 GORABQ5T7V8 394 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 FOXD4L1Q9NU39 408 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 RBM8AQ9Y5S9 174 aaKnown RBP23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 COL4A1P02462 1669 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 TXNRD1Q16881 649 aa23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 UPF3BQ9BZI7 483 aaKnown RBP23.15■■□□□ 1.3
RAB3IP-205ENST00000417413 TAF5LO75529 589 aa23.14■■□□□ 1.29
RAB3IP-205ENST00000417413 PRPF40BQ6NWY9 871 aaKnown RBP23.14■■□□□ 1.29
RAB3IP-205ENST00000417413 ARHGEF1Q92888 912 aaKnown RBP23.14■■□□□ 1.29
RAB3IP-205ENST00000417413 MYH7P12883 1935 aa23.13■■□□□ 1.29
RAB3IP-205ENST00000417413 FGFR2P21802 821 aa23.13■■□□□ 1.29
RAB3IP-205ENST00000417413 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
RAB3IP-205ENST00000417413 ZNF512BQ96KM6 892 aaPredicted RBP23.13■■□□□ 1.29
RAB3IP-205ENST00000417413 LRRC4BQ9NT99 713 aa23.13■■□□□ 1.29
RAB3IP-205ENST00000417413 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 UBR3Q6ZT12 1888 aa23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 ZPR1O75312 459 aa23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 SCARF1Q14162 830 aa23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 SF3B3Q15393 1217 aaKnown RBP23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 MCMDC2Q4G0Z9 681 aa23.12■■□□□ 1.29
RAB3IP-205ENST00000417413 TRAPPC3LQ5T215 181 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 CREB3L3Q68CJ9 461 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 BICDL1Q6ZP65 573 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 TMX3Q96JJ7 454 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 TTC14Q96N46 770 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 SEC62Q99442 399 aaKnown RBP23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 HELLSQ9NRZ9 838 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 TAF1P21675 1872 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 PUM3Q15397 648 aaKnown RBP23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 ZMYM1Q5SVZ6 1142 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 C3orf67Q6ZVT6 689 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 MPHOSPH8Q99549 860 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 TM6SF1Q9BZW5 370 aa23.11■■□□□ 1.29
RAB3IP-205ENST00000417413 SLC27A2O14975 620 aa23.1■■□□□ 1.29
RAB3IP-205ENST00000417413 RFC4P35249 363 aa23.1■■□□□ 1.29
RAB3IP-205ENST00000417413 HELBQ8NG08 1087 aaPredicted RBP23.1■■□□□ 1.29
RAB3IP-205ENST00000417413 LPIN2Q92539 896 aa23.1■■□□□ 1.29
RAB3IP-205ENST00000417413 RNF113AO15541 343 aaKnown RBP23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 SSFA2P28290 1259 aa23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 IGHMBP2P38935 993 aaKnown RBP23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 ZAP70P43403 619 aa23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 FKBP4Q02790 459 aaKnown RBP eCLIP23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 CUL4AQ13619 759 aa23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 CCDC129Q6ZRS4 1044 aa23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 SETDB2Q96T68 719 aa23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 NYXQ9GZU5 481 aa23.09■■□□□ 1.29
RAB3IP-205ENST00000417413 KCNJ4P48050 445 aa23.08■■□□□ 1.29
RAB3IP-205ENST00000417413 RAB3GAP1Q15042 981 aa23.08■■□□□ 1.29
RAB3IP-205ENST00000417413 ADCK5Q3MIX3 580 aa23.08■■□□□ 1.29
RAB3IP-205ENST00000417413 SLFNL1Q499Z3 407 aa23.08■■□□□ 1.29
RAB3IP-205ENST00000417413 MCAMP43121 646 aa23.08■■□□□ 1.28
RAB3IP-205ENST00000417413 ZSWIM6Q9HCJ5 1215 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms