RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 ZGPATQ8N5A5 531 aaKnown RBP20.8■□□□□ 0.92
HDAC10-203ENST00000415993 TNPO1Q92973 898 aaKnown RBP20.8■□□□□ 0.92
HDAC10-203ENST00000415993 CNNM1Q9NRU3 951 aa20.8■□□□□ 0.92
HDAC10-203ENST00000415993 CUL4AQ13619 759 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 CCDC158Q5M9N0 1113 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 RGL2O15211 777 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 MCM4P33991 863 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 ATP2B3Q16720 1220 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 ADCK5Q3MIX3 580 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 CREB3L3Q68CJ9 461 aa20.79■□□□□ 0.92
HDAC10-203ENST00000415993 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
HDAC10-203ENST00000415993 PDE8BO95263 885 aa20.78■□□□□ 0.92
HDAC10-203ENST00000415993 SEPT12Q8IYM1 358 aa20.78■□□□□ 0.92
HDAC10-203ENST00000415993 SEC62Q99442 399 aaKnown RBP20.78■□□□□ 0.92
HDAC10-203ENST00000415993 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
HDAC10-203ENST00000415993 SMIM5Q71RC9 77 aa20.78■□□□□ 0.92
HDAC10-203ENST00000415993 TM6SF1Q9BZW5 370 aa20.78■□□□□ 0.92
HDAC10-203ENST00000415993 BCL2L12Q9HB09 334 aa20.78■□□□□ 0.92
HDAC10-203ENST00000415993 SPEF2Q9C093 1822 aa20.77■□□□□ 0.92
HDAC10-203ENST00000415993 RPS6KA4O75676 772 aa20.77■□□□□ 0.92
HDAC10-203ENST00000415993 MCMDC2Q4G0Z9 681 aa20.77■□□□□ 0.92
HDAC10-203ENST00000415993 USPL1Q5W0Q7 1092 aa20.77■□□□□ 0.92
HDAC10-203ENST00000415993 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
HDAC10-203ENST00000415993 SLC27A2O14975 620 aa20.77■□□□□ 0.91
HDAC10-203ENST00000415993 SCARF1Q14162 830 aa20.77■□□□□ 0.91
HDAC10-203ENST00000415993 ZSWIM6Q9HCJ5 1215 aa20.77■□□□□ 0.91
HDAC10-203ENST00000415993 SEC31BQ9NQW1 1179 aa20.77■□□□□ 0.91
HDAC10-203ENST00000415993 CCNL1Q9UK58 526 aaPredicted RBP20.77■□□□□ 0.91
HDAC10-203ENST00000415993 ABCC12Q96J65 1359 aa20.76■□□□□ 0.91
HDAC10-203ENST00000415993 TTC39AQ5SRH9 613 aa20.76■□□□□ 0.91
HDAC10-203ENST00000415993 GORABQ5T7V8 394 aa20.76■□□□□ 0.91
HDAC10-203ENST00000415993 ZKSCAN1P17029 563 aaPredicted RBP20.75■□□□□ 0.91
HDAC10-203ENST00000415993 CASTP20810 708 aaKnown RBP20.75■□□□□ 0.91
HDAC10-203ENST00000415993 EP400Q96L91 3159 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 SBF2Q86WG5 1849 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 MROH5Q6ZUA9 1318 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 CYP2E1P05181 493 aaPredicted RBP20.75■□□□□ 0.91
HDAC10-203ENST00000415993 HSP90B1P14625 803 aaKnown RBP20.75■□□□□ 0.91
HDAC10-203ENST00000415993 SLFNL1Q499Z3 407 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 CCDC129Q6ZRS4 1044 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 NARFQ9UHQ1 456 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 LAMB2P55268 1798 aa20.75■□□□□ 0.91
HDAC10-203ENST00000415993 LY75O60449 1722 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 CPA1P15085 419 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 KCNJ4P48050 445 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 CCDC152Q4G0S7 254 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 ZMYM1Q5SVZ6 1142 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 NOL8Q76FK4 1167 aaKnown RBP20.74■□□□□ 0.91
HDAC10-203ENST00000415993 AMIGO3Q86WK7 504 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 INTS4Q96HW7 963 aaKnown RBP20.74■□□□□ 0.91
HDAC10-203ENST00000415993 ZNF512BQ96KM6 892 aaPredicted RBP20.74■□□□□ 0.91
HDAC10-203ENST00000415993 JAKMIP1Q96N16 626 aaKnown RBP20.74■□□□□ 0.91
HDAC10-203ENST00000415993 HELLSQ9NRZ9 838 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 RPAP1Q9BWH6 1393 aaPredicted RBP20.74■□□□□ 0.91
HDAC10-203ENST00000415993 SCN7AQ01118 1682 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 FGFR2P21802 821 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 SSFA2P28290 1259 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 AK2P54819 239 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
HDAC10-203ENST00000415993 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
HDAC10-203ENST00000415993 PKP1Q13835 747 aa20.73■□□□□ 0.91
HDAC10-203ENST00000415993 QTRT2Q9H974 415 aaKnown RBP20.73■□□□□ 0.91
HDAC10-203ENST00000415993 TAF6LQ9Y6J9 622 aa20.73■□□□□ 0.91
HDAC10-203ENST00000415993 GNPATO15228 680 aa20.73■□□□□ 0.91
HDAC10-203ENST00000415993 TBC1D9BQ66K14 1250 aa20.73■□□□□ 0.91
HDAC10-203ENST00000415993 CLEC17AQ6ZS10 378 aa20.73■□□□□ 0.91
HDAC10-203ENST00000415993 RUFY3Q7L099 469 aa20.73■□□□□ 0.91
HDAC10-203ENST00000415993 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
HDAC10-203ENST00000415993 ERFEQ4G0M1 354 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 VPS53Q5VIR6 699 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 RNF20Q5VTR2 975 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 MCAMP43121 646 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 ZAP70P43403 619 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 NUCB2P80303 420 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 COL9A3Q14050 684 aaPredicted RBP20.72■□□□□ 0.91
HDAC10-203ENST00000415993 PUM3Q15397 648 aaKnown RBP20.72■□□□□ 0.91
HDAC10-203ENST00000415993 PI16Q6UXB8 463 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 HMG20BQ9P0W2 317 aa20.72■□□□□ 0.91
HDAC10-203ENST00000415993 HELBQ8NG08 1087 aaPredicted RBP20.71■□□□□ 0.91
HDAC10-203ENST00000415993 LPIN2Q92539 896 aa20.71■□□□□ 0.91
HDAC10-203ENST00000415993 BCL11BQ9C0K0 894 aaPredicted RBP20.71■□□□□ 0.91
HDAC10-203ENST00000415993 SRP68Q9UHB9 627 aaKnown RBP20.71■□□□□ 0.91
HDAC10-203ENST00000415993 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
HDAC10-203ENST00000415993 MPHOSPH8Q99549 860 aa20.71■□□□□ 0.91
HDAC10-203ENST00000415993 C3orf67Q6ZVT6 689 aa20.7■□□□□ 0.9
HDAC10-203ENST00000415993 LIMCH1Q9UPQ0 1083 aa20.7■□□□□ 0.9
HDAC10-203ENST00000415993 RTCBQ9Y3I0 505 aaKnown RBP20.7■□□□□ 0.9
HDAC10-203ENST00000415993 TAF1LQ8IZX4 1826 aa20.7■□□□□ 0.9
HDAC10-203ENST00000415993 COL4A1P02462 1669 aa20.7■□□□□ 0.9
HDAC10-203ENST00000415993 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
HDAC10-203ENST00000415993 PDRG1Q9NUG6 133 aa20.7■□□□□ 0.9
HDAC10-203ENST00000415993 ZDHHC9Q9Y397 364 aa20.7■□□□□ 0.9
HDAC10-203ENST00000415993 MAST3O60307 1309 aa20.69■□□□□ 0.9
HDAC10-203ENST00000415993 SLC10A5Q5PT55 438 aa20.69■□□□□ 0.9
HDAC10-203ENST00000415993 CCDC102BQ68D86 513 aa20.69■□□□□ 0.9
HDAC10-203ENST00000415993 BICDL1Q6ZP65 573 aa20.69■□□□□ 0.9
HDAC10-203ENST00000415993 ARHGEF1Q92888 912 aaKnown RBP20.69■□□□□ 0.9
HDAC10-203ENST00000415993 U3KPZ7 1027 aaPredicted RBP20.69■□□□□ 0.9
HDAC10-203ENST00000415993 AKAP11Q9UKA4 1901 aa20.69■□□□□ 0.9
HDAC10-203ENST00000415993 PSMA5P28066 241 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms