RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 A0A087WZG4 1122 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 GPTP24298 496 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 PLA2G4AP47712 749 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 ZNF790Q6PG37 636 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 UBE3BQ7Z3V4 1068 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 PLEKHG2Q9H7P9 1386 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 CDK12Q9NYV4 1490 aaPredicted RBP9.11□□□□□ -0.95
SIK3-203ENST00000415541 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 MAP2K1Q02750 393 aaPredicted RBP9.11□□□□□ -0.95
SIK3-203ENST00000415541 LRMPQ12912 555 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 ANKRD13DQ6ZTN6 518 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 ZNF496Q96IT1 587 aaPredicted RBP9.11□□□□□ -0.95
SIK3-203ENST00000415541 DCAF5Q96JK2 942 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 PLCD4Q9BRC7 762 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 GOLGA6L19H0YKK7 550 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 ERC2O15083 957 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 STARD3NLO95772 234 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 MAP3K11Q16584 847 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 CASTP20810 708 aaKnown RBP9.1□□□□□ -0.95
SIK3-203ENST00000415541 ZNF75DP51815 510 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 EIF4A1P60842 406 aaKnown RBP9.1□□□□□ -0.95
SIK3-203ENST00000415541 AACSQ86V21 672 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 ANKRD44Q8N8A2 993 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
SIK3-203ENST00000415541 ANKARQ7Z5J8 1434 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 MED14O60244 1454 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 CUL4AQ13619 759 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 DHX8Q14562 1220 aaKnown RBP9.1□□□□□ -0.95
SIK3-203ENST00000415541 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
SIK3-203ENST00000415541 ERCC6LQ2NKX8 1250 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 ERBB3P21860 1342 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 TECPR2O15040 1411 aa9.1□□□□□ -0.95
SIK3-203ENST00000415541 PRAMEF22A3QJZ6 481 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 PPP1R12AO14974 1030 aaPredicted RBP9.09□□□□□ -0.95
SIK3-203ENST00000415541 MNAT1P51948 309 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 E2F4Q16254 413 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 GIMAP7Q8NHV1 300 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 TACO1Q9BSH4 297 aaKnown RBP9.09□□□□□ -0.95
SIK3-203ENST00000415541 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 KIF3CO14782 793 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 CCP110O43303 1012 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 CAVIN2O95810 425 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 GSCP56915 257 aaPredicted RBP9.09□□□□□ -0.95
SIK3-203ENST00000415541 TTC22Q5TAA0 569 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 CEP85Q6P2H3 762 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 BICDL1Q6ZP65 573 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 PTCH1Q13635 1447 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 SKILP12757 684 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 SNW1Q13573 536 aaKnown RBP9.09□□□□□ -0.95
SIK3-203ENST00000415541 EFCAB13Q8IY85 973 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 CCDC8Q9H0W5 538 aaPredicted RBP9.09□□□□□ -0.95
SIK3-203ENST00000415541 ATG3Q9NT62 314 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 CDC42BPGQ6DT37 1551 aa9.09□□□□□ -0.95
SIK3-203ENST00000415541 EIF3CLB5ME19 914 aaKnown RBP9.08□□□□□ -0.96
SIK3-203ENST00000415541 KSR2Q6VAB6 950 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 EIF3CQ99613 913 aaKnown RBP9.08□□□□□ -0.96
SIK3-203ENST00000415541 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
SIK3-203ENST00000415541 USP16Q9Y5T5 823 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 CEP170BQ9Y4F5 1589 aaPredicted RBP9.08□□□□□ -0.96
SIK3-203ENST00000415541 FIBPO43427 364 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 A1BGP04217 495 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 LIG1P18858 919 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 ST5P78524 1137 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 OTUD7AQ8TE49 926 aaPredicted RBP9.08□□□□□ -0.96
SIK3-203ENST00000415541 FSD1Q9BTV5 496 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 NUP62CLQ9H1M0 184 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 KIF20BQ96Q89 1820 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 KIF13AQ9H1H9 1805 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 LRRC7Q96NW7 1537 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 TULP1O00294 542 aaPredicted RBP9.08□□□□□ -0.96
SIK3-203ENST00000415541 PHKG2P15735 406 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 CDC25BP30305 580 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 DDB1Q16531 1140 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 ARFGAP3Q9NP61 516 aa9.08□□□□□ -0.96
SIK3-203ENST00000415541 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 FUCA2Q9BTY2 467 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 CNPY2Q9Y2B0 182 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.07□□□□□ -0.965e-9■■□□□ 11.4
SIK3-203ENST00000415541 H0YHG0 523 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 NBPF7P0C2Y1 421 aaPredicted RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 SARNPP82979 210 aaKnown RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 NYAP1Q6ZVC0 841 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 CACTINQ8WUQ7 758 aaKnown RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 RUFY2Q8WXA3 655 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 DDX21Q9NR30 783 aaKnown RBP eCLIP9.07□□□□□ -0.96
SIK3-203ENST00000415541 SPATA31A3Q5VYP0 1347 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 GIGYF1O75420 1035 aaPredicted RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 ZSCAN22P10073 491 aaPredicted RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 GSDMDP57764 484 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 PROSER3Q2NL68 480 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 CCDC57Q2TAC2 916 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 HOMER1Q86YM7 354 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 LRRC8AQ8IWT6 810 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 CNTROBQ8N137 903 aa9.07□□□□□ -0.96
SIK3-203ENST00000415541 TRMT1Q9NXH9 659 aaKnown RBP9.07□□□□□ -0.96
SIK3-203ENST00000415541 A0A087WUV0 522 aaPredicted RBP9.06□□□□□ -0.96
SIK3-203ENST00000415541 KDM4FA0A1W2PPD8 638 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms