RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
LINC01888-201ENST00000415138 HYPKQ9NX55 129 aa11.9□□□□□ -0.5
LINC01888-201ENST00000415138 COL15A1P39059 1388 aa11.9□□□□□ -0.5
LINC01888-201ENST00000415138 POLD1P28340 1107 aa11.89□□□□□ -0.51
LINC01888-201ENST00000415138 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
LINC01888-201ENST00000415138 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
LINC01888-201ENST00000415138 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01888-201ENST00000415138 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
LINC01888-201ENST00000415138 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
LINC01888-201ENST00000415138 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 SMAPO00193 183 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
LINC01888-201ENST00000415138 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
LINC01888-201ENST00000415138 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 NLGN1Q8N2Q7 840 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 TSPYL6Q8N831 410 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 ZNF622Q969S3 477 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC01888-201ENST00000415138 MTFR1LQ9H019 292 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 CHPF2Q9P2E5 772 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
LINC01888-201ENST00000415138 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 VAMP4O75379 141 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 KIF20AO95235 890 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 DDX58O95786 925 aaKnown RBP11.87□□□□□ -0.51
LINC01888-201ENST00000415138 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
LINC01888-201ENST00000415138 IRX3P78415 501 aaPredicted RBP11.87□□□□□ -0.51
LINC01888-201ENST00000415138 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
LINC01888-201ENST00000415138 SMIM5Q71RC9 77 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 PPP1R1BQ9UD71 204 aaPredicted RBP11.87□□□□□ -0.51
LINC01888-201ENST00000415138 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 TSR3Q9UJK0 312 aaKnown RBP11.87□□□□□ -0.51
LINC01888-201ENST00000415138 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 NUP98P52948 1817 aa11.87□□□□□ -0.51
LINC01888-201ENST00000415138 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
LINC01888-201ENST00000415138 NPHP1O15259 732 aa11.86□□□□□ -0.51
LINC01888-201ENST00000415138 TERF1P54274 439 aa11.86□□□□□ -0.51
LINC01888-201ENST00000415138 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
LINC01888-201ENST00000415138 CNPY4Q8N129 248 aa11.86□□□□□ -0.51
LINC01888-201ENST00000415138 TATDN2Q93075 761 aa11.86□□□□□ -0.51
LINC01888-201ENST00000415138 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
LINC01888-201ENST00000415138 ANXA1P04083 346 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 MCCP23508 829 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 MMP14P50281 582 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 MSL1Q68DK7 614 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 TRMT2AQ8IZ69 625 aaKnown RBP11.85□□□□□ -0.51
LINC01888-201ENST00000415138 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
LINC01888-201ENST00000415138 SRP68Q9UHB9 627 aaKnown RBP11.85□□□□□ -0.51
LINC01888-201ENST00000415138 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
LINC01888-201ENST00000415138 ERVV-1B6SEH8 477 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
LINC01888-201ENST00000415138 SLC20A2Q08357 652 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 CLEC4GQ6UXB4 293 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 SETDB2Q96T68 719 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
LINC01888-201ENST00000415138 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
LINC01888-201ENST00000415138 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
LINC01888-201ENST00000415138 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
LINC01888-201ENST00000415138 GYS1P13807 737 aa11.83□□□□□ -0.52
LINC01888-201ENST00000415138 PROSER3Q2NL68 480 aa11.83□□□□□ -0.52
LINC01888-201ENST00000415138 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
LINC01888-201ENST00000415138 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
LINC01888-201ENST00000415138 RRAGDQ9NQL2 400 aaPredicted RBP11.83□□□□□ -0.52
LINC01888-201ENST00000415138 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 PPP4CP60510 307 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 DMTNQ08495 405 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 FKBP5Q13451 457 aaPredicted RBP11.82□□□□□ -0.52
LINC01888-201ENST00000415138 ALDH1L2Q3SY69 923 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 TTLL7Q6ZT98 887 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 PLBD2Q8NHP8 589 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
LINC01888-201ENST00000415138 PHAXQ9H814 394 aaKnown RBP11.82□□□□□ -0.52
LINC01888-201ENST00000415138 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
LINC01888-201ENST00000415138 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
LINC01888-201ENST00000415138 CAMTA2O94983 1202 aa11.81□□□□□ -0.52
LINC01888-201ENST00000415138 MMP10P09238 476 aa11.81□□□□□ -0.52
LINC01888-201ENST00000415138 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
LINC01888-201ENST00000415138 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
LINC01888-201ENST00000415138 NIP7Q9Y221 180 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms