RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 MOB2Q70IA6 237 aa14.01□□□□□ -0.17
CCDC148-203ENST00000409889 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
CCDC148-203ENST00000409889 ERBB4Q15303 1308 aa14□□□□□ -0.17
CCDC148-203ENST00000409889 U2AF1L5P0DN76 240 aaPredicted RBP14□□□□□ -0.17
CCDC148-203ENST00000409889 EIF4A1P60842 406 aaKnown RBP14□□□□□ -0.17
CCDC148-203ENST00000409889 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.17
CCDC148-203ENST00000409889 DOK7Q18PE1 504 aa14□□□□□ -0.17
CCDC148-203ENST00000409889 CFAP53Q96M91 514 aa14□□□□□ -0.17
CCDC148-203ENST00000409889 NSFL1CQ9UNZ2 370 aaKnown RBP14□□□□□ -0.17
CCDC148-203ENST00000409889 COL4A1P02462 1669 aa14□□□□□ -0.17
CCDC148-203ENST00000409889 C6orf229H3BNL8 230 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 TM4SF4P48230 202 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 SCARF1Q14162 830 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
CCDC148-203ENST00000409889 THUMPD2Q9BTF0 503 aaKnown RBP13.99□□□□□ -0.17
CCDC148-203ENST00000409889 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 POLLQ9UGP5 575 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 CEP290O15078 2479 aa13.99□□□□□ -0.17
CCDC148-203ENST00000409889 UBE2Q2LH0YL09 131 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 VIL1P09327 827 aaKnown RBP13.98□□□□□ -0.17
CCDC148-203ENST00000409889 SREBF2Q12772 1141 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
CCDC148-203ENST00000409889 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
CCDC148-203ENST00000409889 LRP10Q7Z4F1 713 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 NLRP10Q86W26 655 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 EYA3Q99504 573 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
CCDC148-203ENST00000409889 TRMT112Q9UI30 125 aaKnown RBP13.98□□□□□ -0.17
CCDC148-203ENST00000409889 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 ZNF609O15014 1411 aa13.98□□□□□ -0.17
CCDC148-203ENST00000409889 RANBP2P49792 3224 aaKnown RBP13.98□□□□□ -0.17
CCDC148-203ENST00000409889 SH3TC1Q8TE82 1336 aa13.97□□□□□ -0.17
CCDC148-203ENST00000409889 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
CCDC148-203ENST00000409889 GPSM2P81274 684 aa13.97□□□□□ -0.17
CCDC148-203ENST00000409889 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
CCDC148-203ENST00000409889 CFHR5Q9BXR6 569 aa13.97□□□□□ -0.17
CCDC148-203ENST00000409889 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
CCDC148-203ENST00000409889 SCAF8Q9UPN6 1271 aaKnown RBP13.97□□□□□ -0.17
CCDC148-203ENST00000409889 ZNF280AP59817 542 aaPredicted RBP13.96□□□□□ -0.17
CCDC148-203ENST00000409889 TTLL12Q14166 644 aaPredicted RBP13.96□□□□□ -0.17
CCDC148-203ENST00000409889 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.17
CCDC148-203ENST00000409889 COLQQ9Y215 455 aaPredicted RBP13.96□□□□□ -0.17
CCDC148-203ENST00000409889 TRIM17Q9Y577 477 aa13.96□□□□□ -0.17
CCDC148-203ENST00000409889 A0A0C4DFX4 3053 aa13.96□□□□□ -0.18
CCDC148-203ENST00000409889 COL6A3P12111 3177 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 ANXA1P04083 346 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 PDIA6Q15084 440 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 PROSER3Q2NL68 480 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 OTOP1Q7RTM1 612 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 LAMB1P07942 1786 aa13.95□□□□□ -0.18
CCDC148-203ENST00000409889 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 G3V3G9 751 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
CCDC148-203ENST00000409889 DSG3P32926 999 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
CCDC148-203ENST00000409889 AGBL3Q8NEM8 1001 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 ZC3H12CQ9C0D7 883 aaKnown RBP13.94□□□□□ -0.18
CCDC148-203ENST00000409889 MYOZ2Q9NPC6 264 aa13.94□□□□□ -0.18
CCDC148-203ENST00000409889 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
CCDC148-203ENST00000409889 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
CCDC148-203ENST00000409889 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
CCDC148-203ENST00000409889 USP17L8P0C7I0 530 aa13.92□□□□□ -0.18
CCDC148-203ENST00000409889 NF2P35240 595 aa13.92□□□□□ -0.18
CCDC148-203ENST00000409889 AIMP1Q12904 312 aaKnown RBP13.92□□□□□ -0.18
CCDC148-203ENST00000409889 TCIRG1Q13488 830 aa13.92□□□□□ -0.18
CCDC148-203ENST00000409889 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
CCDC148-203ENST00000409889 DLL1O00548 723 aa13.91□□□□□ -0.18
CCDC148-203ENST00000409889 UFL1O94874 794 aa13.91□□□□□ -0.18
CCDC148-203ENST00000409889 COPS6Q7L5N1 327 aa13.91□□□□□ -0.18
CCDC148-203ENST00000409889 NEFMP07197 916 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 SF3B3Q15393 1217 aaKnown RBP13.9□□□□□ -0.18
CCDC148-203ENST00000409889 NBPF9Q3BBW0 867 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 XAGE3Q8WTP9 111 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 GMLQ99445 158 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 PODXL2Q9NZ53 605 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 PTPN22Q9Y2R2 807 aa13.9□□□□□ -0.18
CCDC148-203ENST00000409889 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 ZBTB22O15209 634 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 PTPN12Q05209 780 aaKnown RBP13.89□□□□□ -0.19
CCDC148-203ENST00000409889 PRKG1Q13976 671 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 SPRYD7Q5W111 196 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 ARMC5Q96C12 935 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
CCDC148-203ENST00000409889 RPS8P62241 208 aaKnown RBP13.88□□□□□ -0.19
CCDC148-203ENST00000409889 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
CCDC148-203ENST00000409889 ARMC9Q7Z3E5 817 aa13.88□□□□□ -0.19
CCDC148-203ENST00000409889 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
CCDC148-203ENST00000409889 CD99L2Q8TCZ2 262 aa13.88□□□□□ -0.19
CCDC148-203ENST00000409889 ERO1AQ96HE7 468 aa13.88□□□□□ -0.19
CCDC148-203ENST00000409889 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
CCDC148-203ENST00000409889 MANSC4A6NHS7 340 aaPredicted RBP13.87□□□□□ -0.19
CCDC148-203ENST00000409889 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms