RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 SYCE3A1L190 88 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 GIGYF1O75420 1035 aaPredicted RBP10.58□□□□□ -0.72
ITGB6-202ENST00000409583 NEFHP12036 1026 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 CDR1P51861 262 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 LRCH2Q5VUJ6 765 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 SUCLG2Q96I99 432 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 DBNDD2Q9BQY9 259 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 EFCC1Q9HA90 598 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 ZNF287Q9HBT7 754 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 MFSD6Q6ZSS7 791 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 TNPO1Q92973 898 aaKnown RBP10.58□□□□□ -0.72
ITGB6-202ENST00000409583 DRC1Q96MC2 740 aa10.58□□□□□ -0.72
ITGB6-202ENST00000409583 RNF41Q9H4P4 317 aaPredicted RBP10.58□□□□□ -0.72
ITGB6-202ENST00000409583 CCDC192P0DO97 292 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 DTNBO60941 627 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 GJB2P29033 226 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 EPS15P42566 896 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 KCNQ4P56696 695 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 TRAPPC3LQ5T215 181 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 NUP62CLQ9H1M0 184 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 KDM5AP29375 1690 aaKnown RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 INSRP06213 1382 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 A0A1B0GUL7 405 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 BAG3O95817 575 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 LDHCP07864 332 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 NAA16Q6N069 864 aaPredicted RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 TTLL7Q6ZT98 887 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 TMX3Q96JJ7 454 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 ORC3Q9UBD5 711 aaPredicted RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 POLR3GO15318 223 aaPredicted RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 CPA1P15085 419 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 ITGA6P23229 1130 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 NAP1L1P55209 391 aaKnown RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 MCMDC2Q4G0Z9 681 aa10.57□□□□□ -0.72
ITGB6-202ENST00000409583 TRMT1LQ7Z2T5 733 aaKnown RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.57□□□□□ -0.72
ITGB6-202ENST00000409583 CCDC196A0A1B0GTZ2 297 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 GCKRQ14397 625 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 ZC3H12CQ9C0D7 883 aaKnown RBP10.56□□□□□ -0.72
ITGB6-202ENST00000409583 KLF18A0A0U1RQI7 1052 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 PRAMEF22A3QJZ6 481 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 TAF5LO75529 589 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 HOXB7P09629 217 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 LIG1P18858 919 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 ZNF76P36508 570 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 NCOA7Q8NI08 942 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 MYOM2P54296 1465 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 USP6P35125 1406 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 PICALMQ13492 652 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 CCDC191Q8NCU4 936 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 WASF1Q92558 559 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
ITGB6-202ENST00000409583 KDM5CP41229 1560 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 KIF1BO60333 1816 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 BMS1Q14692 1282 aaKnown RBP10.56□□□□□ -0.72
ITGB6-202ENST00000409583 TMCO3Q6UWJ1 677 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 FAM107BQ9H098 131 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 ASAP1Q9ULH1 1129 aa10.56□□□□□ -0.72
ITGB6-202ENST00000409583 PLXNC1O60486 1568 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 EYA2O00167 538 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 SERPINC1P01008 464 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
ITGB6-202ENST00000409583 SKIDA1Q1XH10 827 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 PROSER3Q2NL68 480 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 WDR78Q5VTH9 848 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 CATIPQ7Z7H3 387 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 CDCA7Q9BWT1 371 aaPredicted RBP10.55□□□□□ -0.72
ITGB6-202ENST00000409583 KIAA0754O94854 1291 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 STX6O43752 255 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
ITGB6-202ENST00000409583 CCDC129Q6ZRS4 1044 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 SLF2Q8IX21 1173 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 CNBD1Q8NA66 436 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 MYRIPQ8NFW9 859 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 SLC26A6Q9BXS9 759 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 USP44Q9H0E7 712 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 CCDC87Q9NVE4 849 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
ITGB6-202ENST00000409583 ZFYP08048 801 aaPredicted RBP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 CHMLP26374 656 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 CKAP2LQ8IYA6 745 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 MAGEB6Q8N7X4 407 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 CRNKL1Q9BZJ0 848 aaKnown RBP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 NYXQ9GZU5 481 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 BLMP54132 1417 aaPredicted RBP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 TTLL12Q14166 644 aaPredicted RBP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 FILIP1Q7Z7B0 1213 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 EDC3Q96F86 508 aaKnown RBP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 CPSF2Q9P2I0 782 aaKnown RBP10.54□□□□□ -0.72
ITGB6-202ENST00000409583 PDE4BQ07343 736 aa10.54□□□□□ -0.72
ITGB6-202ENST00000409583 SPTY2D1Q68D10 685 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms