RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 ORC3Q9UBD5 711 aaPredicted RBP9.73□□□□□ -0.85
SNX13-201ENST00000409076 DENND2AQ9ULE3 1009 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 JAG2Q9Y219 1238 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 CRB1P82279 1406 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 ADGRB2O60241 1585 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 GCP02774 474 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 GTF2F1P35269 517 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNX13-201ENST00000409076 STX17P56962 302 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 STAP2Q9UGK3 403 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 TOB2Q14106 344 aaPredicted RBP9.73□□□□□ -0.85
SNX13-201ENST00000409076 TTLL7Q6ZT98 887 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 TRMT44Q8IYL2 757 aaKnown RBP9.73□□□□□ -0.85
SNX13-201ENST00000409076 CEP57L1Q8IYX8 460 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 EEF2KMTQ96G04 330 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 ATP7BP35670 1465 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 PPLO60437 1756 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 UBE2Q2LH0YL09 131 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 GIGYF1O75420 1035 aaPredicted RBP9.72□□□□□ -0.85
SNX13-201ENST00000409076 MCM5P33992 734 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 ERCC6LQ2NKX8 1250 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 FAM89AQ96GI7 184 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 GOLPH3LQ9H4A5 285 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 PRDM4Q9UKN5 801 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 RASSF8Q8NHQ8 419 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 CLIC6Q96NY7 704 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 CLIC4Q9Y696 253 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 NRXN1Q9ULB1 1477 aa9.72□□□□□ -0.85
SNX13-201ENST00000409076 NRDCO43847 1150 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.85
SNX13-201ENST00000409076 ERCC3P19447 782 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 UVSSAQ2YD98 709 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 TOM1L2Q6ZVM7 507 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 PRIMPOLQ96LW4 560 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 CDK12Q9NYV4 1490 aaPredicted RBP9.71□□□□□ -0.85
SNX13-201ENST00000409076 IGSF1Q8N6C5 1336 aa9.71□□□□□ -0.85
SNX13-201ENST00000409076 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.85
SNX13-201ENST00000409076 IGKV5-2P06315 115 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 ADORA1P30542 326 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 TNNI3KQ59H18 835 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 LINS1Q8NG48 757 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 CNNM1Q9NRU3 951 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 CFAP45Q9UL16 551 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 FPGT-TNNI3KV9GXZ4 949 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 SIGLEC1Q9BZZ2 1709 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 HECW2Q9P2P5 1572 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 ATP1A3P13637 1013 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 GYS2P54840 703 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 TRDNQ13061 729 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 NECTIN1Q15223 517 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 ANKRD1Q15327 319 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 DPCR1Q3MIW9 517 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 DDX19AQ9NUU7 478 aaKnown RBP9.71□□□□□ -0.86
SNX13-201ENST00000409076 FRMPD1Q5SYB0 1578 aa9.71□□□□□ -0.86
SNX13-201ENST00000409076 USP6P35125 1406 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 VWDEQ8N2E2 1590 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 TAF5LO75529 589 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 SFPQP23246 707 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNX13-201ENST00000409076 SNW1Q13573 536 aaKnown RBP9.7□□□□□ -0.86
SNX13-201ENST00000409076 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 CLSTN2Q9H4D0 955 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 RABEP2Q9H5N1 569 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 NPHP3Q7Z494 1330 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 SEC31AO94979 1220 aaKnown RBP9.7□□□□□ -0.86
SNX13-201ENST00000409076 MCMDC2Q4G0Z9 681 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 GRAMD1CQ8IYS0 662 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 LRRN4CLQ8ND94 238 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 DESI2Q9BSY9 194 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 UTP14AQ9BVJ6 771 aaKnown RBP9.7□□□□□ -0.86
SNX13-201ENST00000409076 XPO4Q9C0E2 1151 aaKnown RBP9.7□□□□□ -0.86
SNX13-201ENST00000409076 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
SNX13-201ENST00000409076 AFMP43652 599 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 NDUFA8P51970 172 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
SNX13-201ENST00000409076 GOLGB1Q14789 3259 aaKnown RBP9.69□□□□□ -0.86
SNX13-201ENST00000409076 MINDY4BA8MYZ0 360 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 PHACTR2O75167 634 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 SLC3A2P08195 630 aaKnown RBP9.69□□□□□ -0.86
SNX13-201ENST00000409076 NCBP1Q09161 790 aaKnown RBP9.69□□□□□ -0.86
SNX13-201ENST00000409076 STX1AQ16623 288 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 CCDC57Q2TAC2 916 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 MAP4K1Q92918 833 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 SALL3Q9BXA9 1300 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 ADCY9O60503 1353 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 SETBP1Q9Y6X0 1596 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 A2ML1A8K2U0 1454 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 TPM4P67936 248 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 POLA2Q14181 598 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms