RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
SMCR8-201ENST00000406438 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 C6orf50Q9HD87 102 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
SMCR8-201ENST00000406438 NSD2O96028 1365 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
SMCR8-201ENST00000406438 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 MRVI1Q9Y6F6 885 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 JAKMIP2Q96AA8 810 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 CCDC77Q9BR77 488 aa13.69□□□□□ -0.22
SMCR8-201ENST00000406438 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 ADGRL1O94910 1474 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 AFMP43652 599 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 ZBTB16Q05516 673 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 PSMA7O14818 248 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 FOXO3O43524 673 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 PRDM10Q9NQV6 1147 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 TTC14Q96N46 770 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 MAK16Q9BXY0 300 aaKnown RBP13.68□□□□□ -0.22
SMCR8-201ENST00000406438 SH3BP5O60239 455 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 CALM1P0DP23 149 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 CALM2P0DP24 149 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 CALM3P0DP25 149 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 SSFA2P28290 1259 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
SMCR8-201ENST00000406438 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMCR8-201ENST00000406438 SMC1BQ8NDV3 1235 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
SMCR8-201ENST00000406438 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
SMCR8-201ENST00000406438 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
SMCR8-201ENST00000406438 TUBB4BP68371 445 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 TAF12Q16514 161 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 GDPD2Q9HCC8 539 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 TRIM27P14373 513 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 RRAGBQ5VZM2 374 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
SMCR8-201ENST00000406438 GRM1Q13255 1194 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 GPATCH11Q8N954 259 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 CCDC160A6NGH7 325 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 IVLP07476 585 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 NAPAP54920 295 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 DPH6Q7L8W6 267 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 FMNL3Q8IVF7 1028 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 DYNC1I1O14576 645 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 OPA1O60313 960 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 CALML3P27482 149 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
SMCR8-201ENST00000406438 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 CFAP58Q5T655 872 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 TCHPQ9BT92 498 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 TSGA10Q9BZW7 698 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
SMCR8-201ENST00000406438 TMEM110-MUSTN1A8MSY1 372 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 CCDC117Q8IWD4 279 aaPredicted RBP13.65□□□□□ -0.22
SMCR8-201ENST00000406438 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 CYP7A1P22680 504 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 MNAT1P51948 309 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 NME9Q86XW9 330 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 TACC1O75410 805 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 KIF5AQ12840 1032 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 SLC4A4Q9Y6R1 1079 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 ABCC5O15440 1437 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 UNC13AQ9UPW8 1703 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 FAM13AO94988 1023 aa13.65□□□□□ -0.22
SMCR8-201ENST00000406438 IPO4Q8TEX9 1081 aaKnown RBP13.65□□□□□ -0.22
SMCR8-201ENST00000406438 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.23
SMCR8-201ENST00000406438 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
SMCR8-201ENST00000406438 KLF18A0A0U1RQI7 1052 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 PI4KAP2A4QPH2 592 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 GMNNO75496 209 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 PTGS1P23219 599 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 KRT83P78385 493 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 SPAG1Q07617 926 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 KRT28Q7Z3Y7 464 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 PI4KAP1Q8N8J0 262 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 RRP36Q96EU6 259 aaKnown RBP13.64□□□□□ -0.23
SMCR8-201ENST00000406438 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 ARID5AQ03989 594 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 ZMYND15Q9H091 742 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
SMCR8-201ENST00000406438 KRT86O43790 486 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms