RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 DDX46Q7L014 1031 aaKnown RBP34.94■■■■□ 3.18
CSNK1E-205ENST00000405675 PDE8AO60658 829 aa34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 ZPR1O75312 459 aa34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 TMX3Q96JJ7 454 aa34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 SH3TC1Q8TE82 1336 aa34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 APBA3O96018 575 aa34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 TRAPPC3LQ5T215 181 aa34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 TNPO1Q92973 898 aaKnown RBP34.93■■■■□ 3.18
CSNK1E-205ENST00000405675 NTSR2O95665 410 aa34.92■■■■□ 3.18
CSNK1E-205ENST00000405675 MCM4P33991 863 aa34.92■■■■□ 3.18
CSNK1E-205ENST00000405675 PRPF40BQ6NWY9 871 aaKnown RBP34.92■■■■□ 3.18
CSNK1E-205ENST00000405675 BICDL1Q6ZP65 573 aa34.92■■■■□ 3.18
CSNK1E-205ENST00000405675 ZGPATQ8N5A5 531 aaKnown RBP34.92■■■■□ 3.18
CSNK1E-205ENST00000405675 RIC1Q4ADV7 1423 aa34.92■■■■□ 3.18
CSNK1E-205ENST00000405675 TBC1D9BQ66K14 1250 aa34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 ZNF589Q86UQ0 364 aaPredicted RBP34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 RIPOR2Q9Y4F9 1068 aa34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 SCN7AQ01118 1682 aa34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 HCLS1P14317 486 aaPredicted RBP34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 ADORA1P30542 326 aa34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 MCM2P49736 904 aa34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 NOL8Q76FK4 1167 aaKnown RBP34.91■■■■□ 3.18
CSNK1E-205ENST00000405675 MYH3P11055 1940 aa34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 ANKRD18BA2A2Z9 1011 aa34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 RGL2O15211 777 aa34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 MAP4K1Q92918 833 aa34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 KCNB2Q92953 911 aa34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 NECTIN1Q15223 517 aa34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 RBM8AQ9Y5S9 174 aaKnown RBP34.9■■■■□ 3.18
CSNK1E-205ENST00000405675 RFC4P35249 363 aa34.89■■■■□ 3.18
CSNK1E-205ENST00000405675 RFX7Q2KHR2 1363 aa34.89■■■■□ 3.18
CSNK1E-205ENST00000405675 GOLIM4O00461 696 aa34.88■■■■□ 3.17
CSNK1E-205ENST00000405675 PLSCR1O15162 318 aa34.88■■■■□ 3.17
CSNK1E-205ENST00000405675 LDHAL6AQ6ZMR3 332 aa34.88■■■■□ 3.17
CSNK1E-205ENST00000405675 KBTBD3Q8NAB2 608 aa34.88■■■■□ 3.17
CSNK1E-205ENST00000405675 PAG1Q9NWQ8 432 aa34.88■■■■□ 3.17
CSNK1E-205ENST00000405675 AKAP2Q9Y2D5 859 aa34.88■■■■□ 3.17
CSNK1E-205ENST00000405675 XAGE2Q96GT9 111 aa34.87■■■■□ 3.17
CSNK1E-205ENST00000405675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.86■■■■□ 3.17
CSNK1E-205ENST00000405675 SSFA2P28290 1259 aa34.86■■■■□ 3.17
CSNK1E-205ENST00000405675 IFIT1P09914 478 aaKnown RBP34.85■■■■□ 3.17
CSNK1E-205ENST00000405675 TTC14Q96N46 770 aa34.85■■■■□ 3.17
CSNK1E-205ENST00000405675 ADCK5Q3MIX3 580 aa34.85■■■■□ 3.17
CSNK1E-205ENST00000405675 METTL24Q5JXM2 366 aa34.85■■■■□ 3.17
CSNK1E-205ENST00000405675 CREB3L3Q68CJ9 461 aa34.85■■■■□ 3.17
CSNK1E-205ENST00000405675 SEC62Q99442 399 aaKnown RBP34.85■■■■□ 3.17
CSNK1E-205ENST00000405675 CPA1P15085 419 aa34.84■■■■□ 3.17
CSNK1E-205ENST00000405675 C4AP0C0L4 1744 aa34.84■■■■□ 3.17
CSNK1E-205ENST00000405675 TAF5LO75529 589 aa34.84■■■■□ 3.17
CSNK1E-205ENST00000405675 CUL4AQ13619 759 aa34.84■■■■□ 3.17
CSNK1E-205ENST00000405675 CNNM1Q9NRU3 951 aa34.84■■■■□ 3.17
CSNK1E-205ENST00000405675 SETDB2Q96T68 719 aa34.83■■■■□ 3.17
CSNK1E-205ENST00000405675 CWC22Q9HCG8 908 aaKnown RBP34.83■■■■□ 3.17
CSNK1E-205ENST00000405675 ADRA2BP18089 450 aa34.82■■■■□ 3.17
CSNK1E-205ENST00000405675 KCNJ4P48050 445 aa34.82■■■■□ 3.17
CSNK1E-205ENST00000405675 CCDC129Q6ZRS4 1044 aa34.82■■■■□ 3.17
CSNK1E-205ENST00000405675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.82■■■■□ 3.17
CSNK1E-205ENST00000405675 SLFNL1Q499Z3 407 aa34.82■■■■□ 3.16
CSNK1E-205ENST00000405675 UBR3Q6ZT12 1888 aa34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 SLC27A2O14975 620 aa34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 CASTP20810 708 aaKnown RBP34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 ERFEQ4G0M1 354 aa34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 VGLL2Q8N8G2 317 aa34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 JAKMIP1Q96N16 626 aaKnown RBP34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 ATP2B3Q16720 1220 aa34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 GORABQ5T7V8 394 aa34.81■■■■□ 3.16
CSNK1E-205ENST00000405675 PKP1Q13835 747 aa34.8■■■■□ 3.16
CSNK1E-205ENST00000405675 CCDC158Q5M9N0 1113 aa34.8■■■■□ 3.16
CSNK1E-205ENST00000405675 TTC39AQ5SRH9 613 aa34.8■■■■□ 3.16
CSNK1E-205ENST00000405675 DDX60Q8IY21 1712 aaKnown RBP34.79■■■■□ 3.16
CSNK1E-205ENST00000405675 AK2P54819 239 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 SCARF1Q14162 830 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 MCMDC2Q4G0Z9 681 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 IL27Q8NEV9 243 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 TAF6LQ9Y6J9 622 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 LRP5O75197 1615 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 CYP2E1P05181 493 aaPredicted RBP34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 TM6SF1Q9BZW5 370 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 ZSWIM6Q9HCJ5 1215 aa34.78■■■■□ 3.16
CSNK1E-205ENST00000405675 ZKSCAN1P17029 563 aaPredicted RBP34.76■■■■□ 3.16
CSNK1E-205ENST00000405675 GSE1Q14687 1217 aa34.76■■■■□ 3.16
CSNK1E-205ENST00000405675 SEC31BQ9NQW1 1179 aa34.76■■■■□ 3.16
CSNK1E-205ENST00000405675 HSP90B1P14625 803 aaKnown RBP34.76■■■■□ 3.15
CSNK1E-205ENST00000405675 FKBP4Q02790 459 aaKnown RBP eCLIP34.76■■■■□ 3.15
CSNK1E-205ENST00000405675 RUFY3Q7L099 469 aa34.76■■■■□ 3.15
CSNK1E-205ENST00000405675 GTF2E1P29083 439 aaPredicted RBP34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 NUCB2P80303 420 aa34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 COL9A3Q14050 684 aaPredicted RBP34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 NBPF5PQ86XG9 351 aaPredicted RBP34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 LARP6Q9BRS8 491 aaKnown RBP34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 TNS1Q9HBL0 1735 aaKnown RBP34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 ZNF827Q17R98 1081 aa34.75■■■■□ 3.15
CSNK1E-205ENST00000405675 PDE8BO95263 885 aa34.74■■■■□ 3.15
CSNK1E-205ENST00000405675 SPEF2Q9C093 1822 aa34.74■■■■□ 3.15
CSNK1E-205ENST00000405675 ZMYM1Q5SVZ6 1142 aa34.73■■■■□ 3.15
CSNK1E-205ENST00000405675 GBP4Q96PP9 640 aa34.73■■■■□ 3.15
CSNK1E-205ENST00000405675 NYXQ9GZU5 481 aa34.73■■■■□ 3.15
CSNK1E-205ENST00000405675 RPAP1Q9BWH6 1393 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-205ENST00000405675 CCDC152Q4G0S7 254 aa34.73■■■■□ 3.15
CSNK1E-205ENST00000405675 C3orf67Q6ZVT6 689 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms