RNA–Protein interactions for RNA: ENST00000405234.1

TUBBP9-201, Transcript of tubulin beta class I pseudogene 9, humanhuman

BASIC

Gene TUBBP9, Length 1,099 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP9-201ENST00000405234 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
TUBBP9-201ENST00000405234 RUNDC1Q96C34 613 aa11.34□□□□□ -0.59
TUBBP9-201ENST00000405234 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
TUBBP9-201ENST00000405234 CEP350Q5VT06 3117 aa11.34□□□□□ -0.59
TUBBP9-201ENST00000405234 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
TUBBP9-201ENST00000405234 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
TUBBP9-201ENST00000405234 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 IRF6O14896 467 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 PRSS12P56730 875 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 LMOD3Q0VAK6 560 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 PROSER3Q2NL68 480 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 LRP10Q7Z4F1 713 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 BABAM1Q9NWV8 329 aa11.33□□□□□ -0.6
TUBBP9-201ENST00000405234 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 CHL1O00533 1208 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 FKBP4Q02790 459 aaKnown RBP eCLIP11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 SYNE4Q8N205 404 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 PRKRIP1Q9H875 184 aaPredicted RBP11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
TUBBP9-201ENST00000405234 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 PSEN2P49810 448 aa11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 CRY2Q49AN0 593 aa11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 PPP1R42Q7Z4L9 355 aa11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
TUBBP9-201ENST00000405234 NUP98P52948 1817 aa11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 NTSR2O95665 410 aa11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 XAGE3Q8WTP9 111 aa11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 ZNF428Q96B54 188 aa11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
TUBBP9-201ENST00000405234 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 IARSP41252 1262 aaKnown RBP11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 PARP10Q53GL7 1025 aa11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 UTP14AQ9BVJ6 771 aaKnown RBP11.29□□□□□ -0.6
TUBBP9-201ENST00000405234 APAF1O14727 1248 aa11.28□□□□□ -0.6
TUBBP9-201ENST00000405234 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
TUBBP9-201ENST00000405234 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
TUBBP9-201ENST00000405234 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
TUBBP9-201ENST00000405234 DICER1Q9UPY3 1922 aaKnown RBP11.28□□□□□ -0.6
TUBBP9-201ENST00000405234 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
TUBBP9-201ENST00000405234 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 FZD9O00144 591 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 TRIM66O15016 1216 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 PACS2Q86VP3 889 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 NLRP10Q86W26 655 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 PSMD1Q99460 953 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
TUBBP9-201ENST00000405234 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 OATP04181 439 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 HSP90AB3PQ58FF7 597 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 HDGFL1Q5TGJ6 251 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 IBTKQ9P2D0 1353 aaPredicted RBP11.26□□□□□ -0.61
TUBBP9-201ENST00000405234 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 CCDC184Q52MB2 194 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 DUSP27Q5VZP5 1158 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
TUBBP9-201ENST00000405234 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 ZNF853P0CG23 659 aa11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 EPHX2P34913 555 aa11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 LARGE2Q8N3Y3 721 aa11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 DBF4Q9UBU7 674 aaPredicted RBP11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 HACL1Q9UJ83 578 aa11.24□□□□□ -0.61
TUBBP9-201ENST00000405234 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms