RNA–Protein interactions for RNA: ENST00000402541.5

HS1BP3-202, Transcript of HCLS1 binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene HS1BP3, Length 4,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3-202ENST00000402541 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 LAMC1P11047 1609 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 TAF3Q5VWG9 929 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 TTC22Q5TAA0 569 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 HELBQ8NG08 1087 aaPredicted RBP13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 TAF4BQ92750 862 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
HS1BP3-202ENST00000402541 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 CCDC183Q5T5S1 534 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 UBXN4Q92575 508 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 KIF5BP33176 963 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 CYP7A1P22680 504 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 KSR2Q6VAB6 950 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 ZNF397Q8NF99 534 aaPredicted RBP13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
HS1BP3-202ENST00000402541 PDE1AP54750 535 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 FLT4P35916 1363 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 SETBP1Q9Y6X0 1596 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 ERLIN1O75477 346 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 SPTY2D1Q68D10 685 aaPredicted RBP13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 VGLL3A8MV65 326 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 ARHGAP45Q92619 1136 aa13.14□□□□□ -0.31
HS1BP3-202ENST00000402541 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 SPA17Q15506 151 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 NSFL1CQ9UNZ2 370 aaKnown RBP13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 RRAGDQ9NQL2 400 aaPredicted RBP13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 MCM5P33992 734 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 LINS1Q8NG48 757 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 RLBP1P12271 317 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 CRNKL1Q9BZJ0 848 aaKnown RBP13.13□□□□□ -0.31
HS1BP3-202ENST00000402541 NEBLO76041 1014 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 HOXC9P31274 260 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 TSG101Q99816 390 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 VAMP4O75379 141 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 URI1O94763 535 aaPredicted RBP13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 ZNF165P49910 485 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
HS1BP3-202ENST00000402541 IL2RBP14784 551 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 DESP17661 470 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 WTAPQ15007 396 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 RBM8AQ9Y5S9 174 aaKnown RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 ALDH1L1O75891 902 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 ST5P78524 1137 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 UQCRHP07919 91 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 USP8P40818 1118 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 MTIF2P46199 727 aaKnown RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 ZBTB43O43298 467 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 DDX19AQ9NUU7 478 aaKnown RBP13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
HS1BP3-202ENST00000402541 NUCB1Q02818 461 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 CETN2P41208 172 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 MRPL50Q8N5N7 158 aaKnown RBP13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
HS1BP3-202ENST00000402541 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms