RNA–Protein interactions for RNA: ENST00000399810.6

C5orf49-201, Transcript of chromosome 5 open reading frame 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C5orf49, Length 2,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf49-201ENST00000399810 A0A0D9SFI3 127 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 HIP1O00291 1037 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 GOLIM4O00461 696 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 CHGBP05060 677 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 IFIT1P09914 478 aaKnown RBP27.3■■□□□ 1.96
C5orf49-201ENST00000399810 HSP90B1P14625 803 aaKnown RBP27.3■■□□□ 1.96
C5orf49-201ENST00000399810 C3orf67Q6ZVT6 689 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 CCDC24Q8N4L8 307 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 MPHOSPH8Q99549 860 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 C4BP0C0L5 1744 aa27.3■■□□□ 1.96
C5orf49-201ENST00000399810 TAF1LQ8IZX4 1826 aa27.29■■□□□ 1.96
C5orf49-201ENST00000399810 RAD50Q92878 1312 aa27.29■■□□□ 1.96
C5orf49-201ENST00000399810 CCDC158Q5M9N0 1113 aa27.29■■□□□ 1.96
C5orf49-201ENST00000399810 TTC39AQ5SRH9 613 aa27.29■■□□□ 1.96
C5orf49-201ENST00000399810 PTH1RQ03431 593 aa27.28■■□□□ 1.96
C5orf49-201ENST00000399810 PAG1Q9NWQ8 432 aa27.28■■□□□ 1.96
C5orf49-201ENST00000399810 SCN7AQ01118 1682 aa27.28■■□□□ 1.96
C5orf49-201ENST00000399810 DDX60Q8IY21 1712 aaKnown RBP27.28■■□□□ 1.96
C5orf49-201ENST00000399810 NBPF5PQ86XG9 351 aaPredicted RBP27.28■■□□□ 1.96
C5orf49-201ENST00000399810 VGLL2Q8N8G2 317 aa27.28■■□□□ 1.96
C5orf49-201ENST00000399810 SNRKQ9NRH2 765 aa27.28■■□□□ 1.96
C5orf49-201ENST00000399810 PDE8BO95263 885 aa27.27■■□□□ 1.96
C5orf49-201ENST00000399810 FKBP4Q02790 459 aaKnown RBP eCLIP27.27■■□□□ 1.96
C5orf49-201ENST00000399810 K7ELQ4 463 aaPredicted RBP27.26■■□□□ 1.95
C5orf49-201ENST00000399810 HSPA4P34932 840 aa27.26■■□□□ 1.95
C5orf49-201ENST00000399810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.26■■□□□ 1.95
C5orf49-201ENST00000399810 ABCC12Q96J65 1359 aa27.25■■□□□ 1.95
C5orf49-201ENST00000399810 TAF5LO75529 589 aa27.25■■□□□ 1.95
C5orf49-201ENST00000399810 IGHMBP2P38935 993 aaKnown RBP27.25■■□□□ 1.95
C5orf49-201ENST00000399810 FOXD4L1Q9NU39 408 aa27.25■■□□□ 1.95
C5orf49-201ENST00000399810 SNAP23O00161 211 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 KBTBD3Q8NAB2 608 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 ANTXR1Q9H6X2 564 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 MROH5Q6ZUA9 1318 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 RGL2O15211 777 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 SCARF1Q14162 830 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 FAM43AQ8N2R8 423 aa27.24■■□□□ 1.95
C5orf49-201ENST00000399810 NEK4P51957 841 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 SLFNL1Q499Z3 407 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 SLC27A3Q5K4L6 730 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 ZNF589Q86UQ0 364 aaPredicted RBP27.23■■□□□ 1.95
C5orf49-201ENST00000399810 NYXQ9GZU5 481 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 NPHP1O15259 732 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 ST18O60284 1047 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 ANAPC15P60006 121 aa27.23■■□□□ 1.95
C5orf49-201ENST00000399810 EPB41L2O43491 1005 aaKnown RBP27.22■■□□□ 1.95
C5orf49-201ENST00000399810 HSP90AA1P07900 732 aaKnown RBP27.22■■□□□ 1.95
C5orf49-201ENST00000399810 RXRBP28702 533 aa27.22■■□□□ 1.95
C5orf49-201ENST00000399810 CCDC171Q6TFL3 1326 aa27.22■■□□□ 1.95
C5orf49-201ENST00000399810 NFKBIBQ15653 356 aa27.22■■□□□ 1.95
C5orf49-201ENST00000399810 PI16Q6UXB8 463 aa27.22■■□□□ 1.95
C5orf49-201ENST00000399810 SEC62Q99442 399 aaKnown RBP27.22■■□□□ 1.95
C5orf49-201ENST00000399810 UPF3BQ9BZI7 483 aaKnown RBP27.21■■□□□ 1.95
C5orf49-201ENST00000399810 PUM3Q15397 648 aaKnown RBP27.21■■□□□ 1.95
C5orf49-201ENST00000399810 TXNRD1Q16881 649 aa27.21■■□□□ 1.95
C5orf49-201ENST00000399810 TPTE2Q6XPS3 522 aa27.21■■□□□ 1.95
C5orf49-201ENST00000399810 RASEFQ8IZ41 740 aa27.21■■□□□ 1.95
C5orf49-201ENST00000399810 PROM2Q8N271 834 aa27.21■■□□□ 1.95
C5orf49-201ENST00000399810 RTL9Q8NET4 1388 aa27.2■■□□□ 1.95
C5orf49-201ENST00000399810 KCNJ4P48050 445 aa27.2■■□□□ 1.95
C5orf49-201ENST00000399810 PRPF40BQ6NWY9 871 aaKnown RBP27.2■■□□□ 1.95
C5orf49-201ENST00000399810 CCDC129Q6ZRS4 1044 aa27.2■■□□□ 1.95
C5orf49-201ENST00000399810 SNX14Q9Y5W7 946 aa27.2■■□□□ 1.95
C5orf49-201ENST00000399810 LRP5O75197 1615 aa27.2■■□□□ 1.94
C5orf49-201ENST00000399810 SF3B3Q15393 1217 aaKnown RBP27.2■■□□□ 1.94
C5orf49-201ENST00000399810 CDC5LQ99459 802 aaKnown RBP27.2■■□□□ 1.94
C5orf49-201ENST00000399810 ZAP70P43403 619 aa27.19■■□□□ 1.94
C5orf49-201ENST00000399810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.19■■□□□ 1.94
C5orf49-201ENST00000399810 COL4A1P02462 1669 aa27.19■■□□□ 1.94
C5orf49-201ENST00000399810 LAMB2P55268 1798 aa27.19■■□□□ 1.94
C5orf49-201ENST00000399810 SLC10A5Q5PT55 438 aa27.19■■□□□ 1.94
C5orf49-201ENST00000399810 LPIN2Q92539 896 aa27.19■■□□□ 1.94
C5orf49-201ENST00000399810 MED23Q9ULK4 1368 aa27.18■■□□□ 1.94
C5orf49-201ENST00000399810 C4AP0C0L4 1744 aa27.18■■□□□ 1.94
C5orf49-201ENST00000399810 NFIXQ14938 502 aa27.18■■□□□ 1.94
C5orf49-201ENST00000399810 ANKRD18AQ8IVF6 992 aa27.18■■□□□ 1.94
C5orf49-201ENST00000399810 NLRP3Q96P20 1036 aa27.18■■□□□ 1.94
C5orf49-201ENST00000399810 RBM8AQ9Y5S9 174 aaKnown RBP27.18■■□□□ 1.94
C5orf49-201ENST00000399810 PHKA1P46020 1223 aa27.17■■□□□ 1.94
C5orf49-201ENST00000399810 APBA3O96018 575 aa27.17■■□□□ 1.94
C5orf49-201ENST00000399810 ADRA2BP18089 450 aa27.17■■□□□ 1.94
C5orf49-201ENST00000399810 FGFR2P21802 821 aa27.17■■□□□ 1.94
C5orf49-201ENST00000399810 CHRNDQ07001 517 aa27.17■■□□□ 1.94
C5orf49-201ENST00000399810 MCAMP43121 646 aa27.16■■□□□ 1.94
C5orf49-201ENST00000399810 CCDC102BQ68D86 513 aa27.16■■□□□ 1.94
C5orf49-201ENST00000399810 NOL8Q76FK4 1167 aaKnown RBP27.16■■□□□ 1.94
C5orf49-201ENST00000399810 RFX7Q2KHR2 1363 aa27.16■■□□□ 1.94
C5orf49-201ENST00000399810 CELF1Q92879 486 aaKnown RBP27.16■■□□□ 1.94
C5orf49-201ENST00000399810 MAP4K1Q92918 833 aa27.16■■□□□ 1.94
C5orf49-201ENST00000399810 SPEF2Q9C093 1822 aa27.15■■□□□ 1.94
C5orf49-201ENST00000399810 SLC5A1P13866 664 aa27.15■■□□□ 1.94
C5orf49-201ENST00000399810 MCMDC2Q4G0Z9 681 aa27.15■■□□□ 1.94
C5orf49-201ENST00000399810 PKNOX2Q96KN3 472 aa27.14■■□□□ 1.94
C5orf49-201ENST00000399810 GYS1P13807 737 aa27.13■■□□□ 1.93
C5orf49-201ENST00000399810 NECTIN1Q15223 517 aa27.13■■□□□ 1.93
C5orf49-201ENST00000399810 CARMIL3Q8ND23 1372 aa27.13■■□□□ 1.93
C5orf49-201ENST00000399810 TAF1P21675 1872 aa27.13■■□□□ 1.93
C5orf49-201ENST00000399810 SSFA2P28290 1259 aa27.13■■□□□ 1.93
C5orf49-201ENST00000399810 IL17RAQ96F46 866 aa27.13■■□□□ 1.93
C5orf49-201ENST00000399810 RNF113AO15541 343 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms