RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 SLFN5Q08AF3 891 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 RTN1Q16799 776 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 MPNDQ8N594 471 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 NEK1Q96PY6 1258 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 BCS1LQ9Y276 419 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 M0QZ92 97 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 ORC3Q9UBD5 711 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 STAT6P42226 847 aa13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 SREK1Q8WXA9 508 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 BCCIPQ9P287 314 aaKnown RBP eCLIP13.8□□□□□ -0.2
CACNA1C-213ENST00000399629 KANK3Q6NY19 840 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 H7C1D1 291 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 RMND1Q9NWS8 449 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 GGA1Q9UJY5 639 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 KDM5BQ9UGL1 1544 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 PAFAH1B1P43034 410 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 SCAND2PQ9GZW5 306 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 ASXL2Q76L83 1435 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
CACNA1C-213ENST00000399629 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 FSIP1Q8NA03 581 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 FAM83GA6ND36 823 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 ZBTB43O43298 467 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 GNAT2P19087 354 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 NFATC2IPQ8NCF5 419 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 MSANTD4Q8NCY6 345 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 RTL9Q8NET4 1388 aa13.78□□□□□ -0.2
CACNA1C-213ENST00000399629 SLC9C2Q5TAH2 1124 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 TRIM47Q96LD4 638 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 MAST3O60307 1309 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 TTC6Q86TZ1 520 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 PKD2L1Q9P0L9 805 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 PLCH2O75038 1416 aa13.77□□□□□ -0.2
CACNA1C-213ENST00000399629 NDC80O14777 642 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 PPP1R14CQ8TAE6 165 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 SPC25Q9HBM1 224 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 LIMCH1Q9UPQ0 1083 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 CEP63Q96MT8 703 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 CTAGE5O15320 804 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 SLU7O95391 586 aaKnown RBP13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 UQCRHP07919 91 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 SMC1AQ14683 1233 aaKnown RBP13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 PROCA1Q8NCQ7 364 aaPredicted RBP13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
CACNA1C-213ENST00000399629 KLF18A0A0U1RQI7 1052 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 MIGA1Q8NAN2 632 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 TRIM6Q9C030 488 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 MBIPQ9NS73 344 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 CEP83Q9Y592 693 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 SH3BP5O60239 455 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 ARHGEF6Q15052 776 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 GJC1P36383 396 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 ANKRD36BQ8N2N9 1353 aa13.76□□□□□ -0.21
CACNA1C-213ENST00000399629 SFPQP23246 707 aaKnown RBP eCLIP13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 DENND2AQ9ULE3 1009 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 ZBED4O75132 1171 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 DDX23Q9BUQ8 820 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 GRM8O00222 908 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 MAP9Q49MG5 647 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 RNF34Q969K3 372 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 PLVAPQ9BX97 442 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 CSADQ9Y600 493 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 NACA2Q9H009 215 aa13.75□□□□□ -0.21
CACNA1C-213ENST00000399629 MCM3P25205 808 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 GBP3Q9H0R5 595 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 PCF11O94913 1555 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms