RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 ERBB3P21860 1342 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 TAF5LO75529 589 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 AOPEPQ8N6M6 819 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
APOB-202ENST00000399256 NEK1Q96PY6 1258 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 CHGBP05060 677 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 HOXB7P09629 217 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 TEFQ10587 303 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
APOB-202ENST00000399256 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
APOB-202ENST00000399256 NDUFB9Q9Y6M9 179 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 ALDH1L1O75891 902 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 KAZALD1Q96I82 304 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 ZBTB22O15209 634 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 SLU7O95391 586 aaKnown RBP16.39■□□□□ 0.21
APOB-202ENST00000399256 SCRN1Q12765 414 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 CCDC73Q6ZRK6 1079 aa16.39■□□□□ 0.21
APOB-202ENST00000399256 DCCP43146 1447 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 COL15A1P39059 1388 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
APOB-202ENST00000399256 FGD1P98174 961 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 CTAGE5O15320 804 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
APOB-202ENST00000399256 KSR2Q6VAB6 950 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 ABTB2Q8N961 1025 aa16.38■□□□□ 0.21
APOB-202ENST00000399256 ZNF335Q9H4Z2 1342 aaPredicted RBP16.38■□□□□ 0.21
APOB-202ENST00000399256 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
APOB-202ENST00000399256 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
APOB-202ENST00000399256 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 ESCO1Q5FWF5 840 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 C1orf167Q5SNV9 1468 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 GRM8O00222 908 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 ANO10Q9NW15 660 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 ZNF446Q9NWS9 450 aa16.37■□□□□ 0.21
APOB-202ENST00000399256 KRT32Q14532 448 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
APOB-202ENST00000399256 GUCY1B3Q02153 619 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 FSIP1Q8NA03 581 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 MST1RQ04912 1400 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 ME1P48163 572 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 NBPF6Q5VWK0 638 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 CEP57L1Q8IYX8 460 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 NBPF4Q96M43 638 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 JCADQ9P266 1359 aa16.36■□□□□ 0.21
APOB-202ENST00000399256 ERCC6LQ2NKX8 1250 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 USP54Q70EL1 1684 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
APOB-202ENST00000399256 CYP21A2P08686 494 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
APOB-202ENST00000399256 CHMP4AQ9BY43 222 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 NAP1L2Q9ULW6 460 aaPredicted RBP16.35■□□□□ 0.21
APOB-202ENST00000399256 KIF1AQ12756 1690 aa16.35■□□□□ 0.21
APOB-202ENST00000399256 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
APOB-202ENST00000399256 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 CCT2P78371 535 aaKnown RBP16.34■□□□□ 0.21
APOB-202ENST00000399256 FAM160A1Q05DH4 1040 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 SYT10Q6XYQ8 523 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 NSUN7Q8NE18 718 aaKnown RBP16.34■□□□□ 0.21
APOB-202ENST00000399256 ENGASEQ8NFI3 743 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 E4F1Q66K89 784 aaPredicted RBP16.34■□□□□ 0.21
APOB-202ENST00000399256 SMARCC2Q8TAQ2 1214 aa16.34■□□□□ 0.21
APOB-202ENST00000399256 DNAJC2Q99543 621 aaKnown RBP16.34■□□□□ 0.21
APOB-202ENST00000399256 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.21
APOB-202ENST00000399256 SMC2O95347 1197 aa16.33■□□□□ 0.21
APOB-202ENST00000399256 ATF3P18847 181 aa16.33■□□□□ 0.21
APOB-202ENST00000399256 APOBRQ0VD83 1088 aa16.33■□□□□ 0.21
APOB-202ENST00000399256 LINS1Q8NG48 757 aa16.33■□□□□ 0.21
APOB-202ENST00000399256 CCDC66A2RUB6 948 aa16.33■□□□□ 0.2
APOB-202ENST00000399256 CTDNEP1O95476 244 aa16.33■□□□□ 0.2
APOB-202ENST00000399256 GSDMDP57764 484 aa16.33■□□□□ 0.2
APOB-202ENST00000399256 STOX1Q6ZVD7 989 aa16.33■□□□□ 0.2
APOB-202ENST00000399256 TMC6Q7Z403 805 aa16.33■□□□□ 0.2
APOB-202ENST00000399256 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
APOB-202ENST00000399256 NAA16Q6N069 864 aaPredicted RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 CCDC9Q9Y3X0 531 aaKnown RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 SDF4Q9BRK5 362 aa16.32■□□□□ 0.2
APOB-202ENST00000399256 TMEM51Q9NW97 253 aa16.32■□□□□ 0.2
APOB-202ENST00000399256 ZNF609O15014 1411 aa16.32■□□□□ 0.2
APOB-202ENST00000399256 KIF2AO00139 706 aaPredicted RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 PFKFB2O60825 505 aa16.32■□□□□ 0.2
APOB-202ENST00000399256 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
APOB-202ENST00000399256 ARMCX5Q6P1M9 558 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms