RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 RNF41Q9H4P4 317 aaPredicted RBP12.72□□□□□ -0.37
GAREM1-202ENST00000399218 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 FERMT3Q86UX7 667 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 EPS15P42566 896 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
GAREM1-202ENST00000399218 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 LIG1P18858 919 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 TXLNAP40222 546 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
GAREM1-202ENST00000399218 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
GAREM1-202ENST00000399218 GYG1P46976 350 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 ME1P48163 572 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 CUL5Q93034 780 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
GAREM1-202ENST00000399218 EYA2O00167 538 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 CDKL5O76039 1030 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 CHMP5Q9NZZ3 219 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 MAP3K15Q6ZN16 1313 aa12.71□□□□□ -0.37
GAREM1-202ENST00000399218 SASS6Q6UVJ0 657 aa12.71□□□□□ -0.38
GAREM1-202ENST00000399218 H7C1D1 291 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 NUCB2P80303 420 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 NLRP5P59047 1200 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 DEFB132Q7Z7B7 95 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 DBNDD1Q9H9R9 158 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
GAREM1-202ENST00000399218 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 GOLGA6L3A6NEY3 463 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 SDSP20132 328 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 TNNI2P48788 182 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 SEC31BQ9NQW1 1179 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 ATG3Q9NT62 314 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 PDE1AP54750 535 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 GREM2Q9H772 168 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 DENND2AQ9ULE3 1009 aa12.7□□□□□ -0.38
GAREM1-202ENST00000399218 PPEF1O14829 653 aaPredicted RBP12.69□□□□□ -0.38
GAREM1-202ENST00000399218 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
GAREM1-202ENST00000399218 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
GAREM1-202ENST00000399218 NOL7Q9UMY1 257 aaKnown RBP12.69□□□□□ -0.38
GAREM1-202ENST00000399218 TCP10L2B9ZVM9 353 aa12.69□□□□□ -0.38
GAREM1-202ENST00000399218 C21orf2O43822 256 aa12.69□□□□□ -0.38
GAREM1-202ENST00000399218 MBD4O95243 580 aa12.69□□□□□ -0.38
GAREM1-202ENST00000399218 IFIT1BQ5T764 474 aaKnown RBP12.69□□□□□ -0.38
GAREM1-202ENST00000399218 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
GAREM1-202ENST00000399218 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
GAREM1-202ENST00000399218 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
GAREM1-202ENST00000399218 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 PREX1Q8TCU6 1659 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 RAD17O75943 681 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 SSRP1Q08945 709 aaKnown RBP12.68□□□□□ -0.38
GAREM1-202ENST00000399218 MCMDC2Q4G0Z9 681 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
GAREM1-202ENST00000399218 TTF2Q9UNY4 1162 aaKnown RBP12.68□□□□□ -0.38
GAREM1-202ENST00000399218 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 RXRAP19793 462 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 PDCP20941 246 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 BCAMP50895 628 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
GAREM1-202ENST00000399218 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 PICK1Q9NRD5 415 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
GAREM1-202ENST00000399218 NUCB1Q02818 461 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 LRRC24Q50LG9 513 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 SLC26A6Q9BXS9 759 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 HLFQ16534 295 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
GAREM1-202ENST00000399218 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
GAREM1-202ENST00000399218 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 MCM2P49736 904 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 EZH2Q15910 746 aaKnown RBP12.67□□□□□ -0.38
GAREM1-202ENST00000399218 DALRD3Q5D0E6 543 aaKnown RBP12.67□□□□□ -0.38
GAREM1-202ENST00000399218 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 ANKRD20A12PQ8NF67 263 aa12.67□□□□□ -0.38
GAREM1-202ENST00000399218 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 WTAPQ15007 396 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
GAREM1-202ENST00000399218 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
GAREM1-202ENST00000399218 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
GAREM1-202ENST00000399218 VPS72Q15906 364 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 TGFBRAP1Q8WUH2 860 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
GAREM1-202ENST00000399218 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
GAREM1-202ENST00000399218 HOXB7P09629 217 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms