RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 BABAM1Q9NWV8 329 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 RIC1Q4ADV7 1423 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 LAMB2P55268 1798 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 TAF1P21675 1872 aa12.83□□□□□ -0.36
NIFKP1-201ENST00000398317 PARP10Q53GL7 1025 aa12.83□□□□□ -0.36
NIFKP1-201ENST00000398317 LARGE2Q8N3Y3 721 aa12.83□□□□□ -0.36
NIFKP1-201ENST00000398317 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
NIFKP1-201ENST00000398317 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
NIFKP1-201ENST00000398317 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
NIFKP1-201ENST00000398317 ADAMTSL1Q8N6G6 1762 aa12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 GPC2Q8N158 579 aa12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 WDR70Q9NW82 654 aa12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
NIFKP1-201ENST00000398317 CHL1O00533 1208 aa12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 ABCC4O15439 1325 aa12.81□□□□□ -0.36
NIFKP1-201ENST00000398317 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 TCIRG1Q13488 830 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 AOC3Q16853 763 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 PNMA8AQ86V59 439 aaPredicted RBP12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 CNTNAP1P78357 1384 aa12.8□□□□□ -0.36
NIFKP1-201ENST00000398317 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 EPS15P42566 896 aa12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 HSP90AB3PQ58FF7 597 aa12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 NIM1KQ8IY84 436 aa12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
NIFKP1-201ENST00000398317 DPYSL4O14531 572 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 TBC1D12O60347 775 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 VEGFBP49765 207 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 SCNN1DP51172 638 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 HDGFL1Q5TGJ6 251 aa12.78□□□□□ -0.36
NIFKP1-201ENST00000398317 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
NIFKP1-201ENST00000398317 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
NIFKP1-201ENST00000398317 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 FOXN1O15353 648 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 BBOX1O75936 387 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 MPNDQ8N594 471 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 SH3TC1Q8TE82 1336 aa12.76□□□□□ -0.37
NIFKP1-201ENST00000398317 CXCL9Q07325 125 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 GRAPQ13588 217 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 SUPT20HQ8NEM7 779 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 PLBD2Q8NHP8 589 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 RTFDC1Q9BY42 306 aaPredicted RBP12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
NIFKP1-201ENST00000398317 EVI5O60447 810 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 HOXB7P09629 217 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 E2F4Q16254 413 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 DEFB115Q30KQ5 88 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 USP50Q70EL3 339 aaPredicted RBP12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
NIFKP1-201ENST00000398317 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
NIFKP1-201ENST00000398317 TRAF5O00463 557 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms