RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 COL18A1P39060 1754 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 HEG1Q9ULI3 1381 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 ERICH4A6NGS2 130 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 IRX3P78415 501 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 LRMPQ12912 555 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 CCDC186Q7Z3E2 898 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 BICD2Q8TD16 824 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 NAA30Q147X3 362 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-201ENST00000397901 PAXIP1Q6ZW49 1069 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-201ENST00000397901 SNRKQ9NRH2 765 aa18.77■□□□□ 0.6
CHMP1A-201ENST00000397901 NRBP1Q9UHY1 535 aa18.77■□□□□ 0.6
CHMP1A-201ENST00000397901 NR1I2O75469 434 aa18.77■□□□□ 0.59
CHMP1A-201ENST00000397901 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.59
CHMP1A-201ENST00000397901 NDUFB9Q9Y6M9 179 aa18.77■□□□□ 0.59
CHMP1A-201ENST00000397901 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 DDX58O95786 925 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 DDX11Q96FC9 970 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 TRIM5Q9C035 493 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 CLSTN2Q9H4D0 955 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 IGKV5-2P06315 115 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 PGBD1Q96JS3 809 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 DDX19AQ9NUU7 478 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-201ENST00000397901 CHGBP05060 677 aa18.75■□□□□ 0.59
CHMP1A-201ENST00000397901 KMT5BQ4FZB7 885 aa18.75■□□□□ 0.59
CHMP1A-201ENST00000397901 DNAJC25Q9H1X3 360 aa18.75■□□□□ 0.59
CHMP1A-201ENST00000397901 TAF5LO75529 589 aa18.75■□□□□ 0.59
CHMP1A-201ENST00000397901 MYL6BP14649 208 aa18.75■□□□□ 0.59
CHMP1A-201ENST00000397901 EPHA10Q5JZY3 1008 aa18.75■□□□□ 0.59
CHMP1A-201ENST00000397901 UTYO14607 1347 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 HSP90B1P14625 803 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 BRF1Q92994 677 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 DDX21Q9NR30 783 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 ZNF75DP51815 510 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 CCDC129Q6ZRS4 1044 aa18.74■□□□□ 0.59
CHMP1A-201ENST00000397901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 FOSBP53539 338 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 COL15A1P39059 1388 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 ABCC6O95255 1503 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 H3BQV1 296 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 ZNF165P49910 485 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 PDIA6Q15084 440 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 SLFNL1Q499Z3 407 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 GTF3C6Q969F1 213 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 LRRC2Q9BYS8 371 aa18.73■□□□□ 0.59
CHMP1A-201ENST00000397901 CYP2C19P33261 490 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 Q6ZUG5 572 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 NEK1Q96PY6 1258 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 SCN11AQ9UI33 1791 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 RESTQ13127 1097 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 RBM43Q6ZSC3 357 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 PLA2G4DQ86XP0 818 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 MYD88Q99836 296 aa18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 FEZ2Q9UHY8 353 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-201ENST00000397901 TPD52L1Q16890 204 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-201ENST00000397901 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
CHMP1A-201ENST00000397901 TDRD7Q8NHU6 1098 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-201ENST00000397901 DBNLQ9UJU6 430 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-201ENST00000397901 JCADQ9P266 1359 aa18.71■□□□□ 0.59
CHMP1A-201ENST00000397901 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 NEXNQ0ZGT2 675 aa18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 TSGA10IPQ3SY00 556 aa18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 ZSCAN25Q6NSZ9 544 aa18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 NOL10Q9BSC4 688 aaKnown RBP18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.58
CHMP1A-201ENST00000397901 MEGF6O75095 1541 aa18.7■□□□□ 0.58
CHMP1A-201ENST00000397901 HSPA2P54652 639 aa18.7■□□□□ 0.58
CHMP1A-201ENST00000397901 RBM6P78332 1123 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-201ENST00000397901 XAGE3Q8WTP9 111 aa18.7■□□□□ 0.58
CHMP1A-201ENST00000397901 RAPGEF4Q8WZA2 1011 aa18.7■□□□□ 0.58
CHMP1A-201ENST00000397901 KDM6AO15550 1401 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-201ENST00000397901 TFCP2Q12800 502 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 GCKRQ14397 625 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 KRT32Q14532 448 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 CABLES1Q8TDN4 633 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 HNRNPH2P55795 449 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 SPATA31A3Q5VYP0 1347 aa18.69■□□□□ 0.58
CHMP1A-201ENST00000397901 FBXO38Q6PIJ6 1188 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 ERO1AQ96HE7 468 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 CYP21A2P08686 494 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 CCDC144BQ3MJ40 725 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 TNNI3KQ59H18 835 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 COPS6Q7L5N1 327 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 CCDC144CPQ8IYA2 1237 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms