RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-206ENST00000397163 ZSCAN16Q9H4T2 348 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-206ENST00000397163 ADGRL3Q9HAR2 1447 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 A0A087WWV3 80 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 CTAGE5O15320 804 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-206ENST00000397163 KRT32Q14532 448 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 NEK1Q96PY6 1258 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 ALDH8A1Q9H2A2 487 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-206ENST00000397163 ZNF446Q9NWS9 450 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 LRRC37A3O60309 1634 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 CACNA1FO60840 1977 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-206ENST00000397163 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
CAPN3-206ENST00000397163 GYS2P54840 703 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 Q6ZUG5 572 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 ABTB2Q8N961 1025 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 EDC3Q96F86 508 aaKnown RBP10.73□□□□□ -0.69
CAPN3-206ENST00000397163 SUCLG2Q96I99 432 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 ADAMTS13Q76LX8 1427 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 PTPRUQ92729 1446 aa10.73□□□□□ -0.69
CAPN3-206ENST00000397163 KSR2Q6VAB6 950 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 NYAP1Q6ZVC0 841 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 LRRN4CLQ8ND94 238 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 ERO1AQ96HE7 468 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 LRRC2Q9BYS8 371 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 BICC1Q9H694 974 aaKnown RBP10.72□□□□□ -0.69
CAPN3-206ENST00000397163 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 RSPH14Q9UHP6 348 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 TAF5LO75529 589 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 PROSER3Q2NL68 480 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 FTOQ9C0B1 505 aaKnown RBP eCLIP10.72□□□□□ -0.69
CAPN3-206ENST00000397163 ANO10Q9NW15 660 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 AMOTL2Q9Y2J4 779 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 MED23Q9ULK4 1368 aa10.72□□□□□ -0.69
CAPN3-206ENST00000397163 GRM8O00222 908 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 TRIM66O15016 1216 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 SLU7O95391 586 aaKnown RBP10.71□□□□□ -0.69
CAPN3-206ENST00000397163 C10orf67Q8IYJ2 551 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 CEP57L1Q8IYX8 460 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 CCAR2Q8N163 923 aaKnown RBP10.71□□□□□ -0.69
CAPN3-206ENST00000397163 SECISBP2LQ93073 1101 aaKnown RBP10.71□□□□□ -0.69
CAPN3-206ENST00000397163 FMN2Q9NZ56 1722 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 CRYBG1Q9Y4K1 1723 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 CCZ1BP86790 482 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-206ENST00000397163 AIMP1Q12904 312 aaKnown RBP10.71□□□□□ -0.69
CAPN3-206ENST00000397163 MPRIPQ6WCQ1 1025 aa10.71□□□□□ -0.69
CAPN3-206ENST00000397163 CEMIPQ8WUJ3 1361 aa10.71□□□□□ -0.7
CAPN3-206ENST00000397163 TSGA10IPQ3SY00 556 aa10.71□□□□□ -0.7
CAPN3-206ENST00000397163 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.7
CAPN3-206ENST00000397163 RGS22Q8NE09 1264 aa10.71□□□□□ -0.7
CAPN3-206ENST00000397163 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.7
CAPN3-206ENST00000397163 ERCC4Q92889 916 aaPredicted RBP10.71□□□□□ -0.7
CAPN3-206ENST00000397163 N4BP2Q86UW6 1770 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-206ENST00000397163 NWD1Q149M9 1564 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 ME1P48163 572 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 GORABQ5T7V8 394 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-206ENST00000397163 FSIP1Q8NA03 581 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 GOLPH3LQ9H4A5 285 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 TOPAZ1Q8N9V7 1692 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 SLC20A2Q08357 652 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 SCRN1Q12765 414 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 ERCC6LQ2NKX8 1250 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 DHX40Q8IX18 779 aaKnown RBP10.7□□□□□ -0.7
CAPN3-206ENST00000397163 LINS1Q8NG48 757 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 RCOR1Q9UKL0 485 aa10.7□□□□□ -0.7
CAPN3-206ENST00000397163 KIF2AO00139 706 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-206ENST00000397163 CYP2C19P33261 490 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 GSDMDP57764 484 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 ZRSR1Q15695 479 aaKnown RBP10.69□□□□□ -0.7
CAPN3-206ENST00000397163 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 KAZALD1Q96I82 304 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 NAT10Q9H0A0 1025 aaKnown RBP10.69□□□□□ -0.7
CAPN3-206ENST00000397163 PPFIA3O75145 1194 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 SNW1Q13573 536 aaKnown RBP10.69□□□□□ -0.7
CAPN3-206ENST00000397163 NBPF6Q5VWK0 638 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 SYT10Q6XYQ8 523 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 NBPF4Q96M43 638 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 ZNF396Q96N95 335 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-206ENST00000397163 USP28Q96RU2 1077 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 LCMT1Q9UIC8 334 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 ERBB3P21860 1342 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 SMC2O95347 1197 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 ST5P78524 1137 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 GUCY1B3Q02153 619 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 FAM160A1Q05DH4 1040 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 STRCQ7RTU9 1775 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
CAPN3-206ENST00000397163 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-206ENST00000397163 DDX58O95786 925 aaKnown RBP10.68□□□□□ -0.7
CAPN3-206ENST00000397163 ADD1P35611 737 aaKnown RBP10.68□□□□□ -0.7
CAPN3-206ENST00000397163 USPL1Q5W0Q7 1092 aa10.68□□□□□ -0.7
CAPN3-206ENST00000397163 KRBA2Q6ZNG9 492 aa10.68□□□□□ -0.7
CAPN3-206ENST00000397163 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
CAPN3-206ENST00000397163 TOMM22Q9NS69 142 aa10.68□□□□□ -0.7
CAPN3-206ENST00000397163 PTPDC1A2A3K4 754 aa10.68□□□□□ -0.7
CAPN3-206ENST00000397163 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms