RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
MCF2L-209ENST00000397036 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
MCF2L-209ENST00000397036 MMP10P09238 476 aa16.64■□□□□ 0.25
MCF2L-209ENST00000397036 ATP5JP18859 108 aa16.64■□□□□ 0.25
MCF2L-209ENST00000397036 SDSP20132 328 aa16.64■□□□□ 0.25
MCF2L-209ENST00000397036 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
MCF2L-209ENST00000397036 UPF1Q92900 1129 aaKnown RBP eCLIP16.64■□□□□ 0.25
MCF2L-209ENST00000397036 TUBGCP6Q96RT7 1819 aa16.64■□□□□ 0.25
MCF2L-209ENST00000397036 A0A1B0GUL7 405 aa16.63■□□□□ 0.25
MCF2L-209ENST00000397036 FGFR2P21802 821 aa16.63■□□□□ 0.25
MCF2L-209ENST00000397036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
MCF2L-209ENST00000397036 TIMM10P62072 90 aa16.62■□□□□ 0.25
MCF2L-209ENST00000397036 ZNF609O15014 1411 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 CDC45O75419 566 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 GRAPQ13588 217 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
MCF2L-209ENST00000397036 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-209ENST00000397036 LPIN2Q92539 896 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 ZNF512BQ96KM6 892 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-209ENST00000397036 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 BCL11AQ9H165 835 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 NRXN2Q9P2S2 1712 aa16.61■□□□□ 0.25
MCF2L-209ENST00000397036 BBOX1O75936 387 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
MCF2L-209ENST00000397036 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
MCF2L-209ENST00000397036 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
MCF2L-209ENST00000397036 MINPP1Q9UNW1 487 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 ZBTB22O15209 634 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 PDE6BP35913 854 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 UBE4AQ14139 1066 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 TMC4Q7Z404 712 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
MCF2L-209ENST00000397036 CHRNDQ07001 517 aa16.59■□□□□ 0.25
MCF2L-209ENST00000397036 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
MCF2L-209ENST00000397036 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
MCF2L-209ENST00000397036 EVI5LQ96CN4 794 aa16.59■□□□□ 0.25
MCF2L-209ENST00000397036 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
MCF2L-209ENST00000397036 CASC1Q6TDU7 716 aa16.58■□□□□ 0.24
MCF2L-209ENST00000397036 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.24
MCF2L-209ENST00000397036 HAUS7Q99871 368 aa16.58■□□□□ 0.24
MCF2L-209ENST00000397036 IFIT1P09914 478 aaKnown RBP16.57■□□□□ 0.24
MCF2L-209ENST00000397036 SRGNP10124 158 aa16.57■□□□□ 0.24
MCF2L-209ENST00000397036 SLC5A1P13866 664 aa16.57■□□□□ 0.24
MCF2L-209ENST00000397036 NPR1P16066 1061 aa16.57■□□□□ 0.24
MCF2L-209ENST00000397036 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
MCF2L-209ENST00000397036 BOLA2Q9H3K6 86 aa16.56■□□□□ 0.24
MCF2L-209ENST00000397036 ALDH1B1P30837 517 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
MCF2L-209ENST00000397036 HIP1O00291 1037 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 UQCRFS1P1P0C7P4 283 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 CHMLP26374 656 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 ADORA1P30542 326 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-209ENST00000397036 MASTLQ96GX5 879 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 LEMD3Q9Y2U8 911 aa16.55■□□□□ 0.24
MCF2L-209ENST00000397036 TNRC6CQ9HCJ0 1690 aaKnown RBP16.54■□□□□ 0.24
MCF2L-209ENST00000397036 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
MCF2L-209ENST00000397036 TAF5LO75529 589 aa16.54■□□□□ 0.24
MCF2L-209ENST00000397036 SEC24BO95487 1268 aa16.54■□□□□ 0.24
MCF2L-209ENST00000397036 ARID4AP29374 1257 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-209ENST00000397036 RFX7Q2KHR2 1363 aa16.54■□□□□ 0.24
MCF2L-209ENST00000397036 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
MCF2L-209ENST00000397036 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
MCF2L-209ENST00000397036 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
MCF2L-209ENST00000397036 C15orf52Q6ZUT6 534 aaKnown RBP16.53■□□□□ 0.24
MCF2L-209ENST00000397036 PDGFDQ9GZP0 370 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-209ENST00000397036 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
MCF2L-209ENST00000397036 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
MCF2L-209ENST00000397036 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
MCF2L-209ENST00000397036 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
MCF2L-209ENST00000397036 XDHP47989 1333 aa16.52■□□□□ 0.23
MCF2L-209ENST00000397036 COL4A1P02462 1669 aa16.51■□□□□ 0.23
MCF2L-209ENST00000397036 H0YIN7 160 aa16.51■□□□□ 0.23
MCF2L-209ENST00000397036 ZNF804BA4D1E1 1349 aa16.51■□□□□ 0.23
MCF2L-209ENST00000397036 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 KBTBD3Q8NAB2 608 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 REC8O95072 547 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 MAP4K4O95819 1239 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-209ENST00000397036 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 LRRFIP1Q32MZ4 808 aaKnown RBP16.5■□□□□ 0.23
MCF2L-209ENST00000397036 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 ESYT1Q9BSJ8 1104 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
MCF2L-209ENST00000397036 SNAP23O00161 211 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 SEMA3EO15041 775 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 PHKA1P46020 1223 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 TTF1Q15361 905 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-209ENST00000397036 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms