RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 UFL1O94874 794 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 CNTROBQ8N137 903 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 JMYQ8N9B5 988 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
PTPN20-205ENST00000395721 GPRC5DQ9NZD1 345 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 PASKQ96RG2 1323 aa11.21□□□□□ -0.61
PTPN20-205ENST00000395721 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.61
PTPN20-205ENST00000395721 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.61
PTPN20-205ENST00000395721 LTBP1Q14766 1721 aa11.21□□□□□ -0.62
PTPN20-205ENST00000395721 LINS1Q8NG48 757 aa11.21□□□□□ -0.62
PTPN20-205ENST00000395721 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.62
PTPN20-205ENST00000395721 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.62
PTPN20-205ENST00000395721 DBNDD1Q9H9R9 158 aa11.21□□□□□ -0.62
PTPN20-205ENST00000395721 POLLQ9UGP5 575 aa11.21□□□□□ -0.62
PTPN20-205ENST00000395721 COL4A1P02462 1669 aa11.2□□□□□ -0.62
PTPN20-205ENST00000395721 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
PTPN20-205ENST00000395721 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
PTPN20-205ENST00000395721 CACNA1FO60840 1977 aa11.2□□□□□ -0.62
PTPN20-205ENST00000395721 ECE2O60344 883 aa11.2□□□□□ -0.62
PTPN20-205ENST00000395721 ITGBL1O95965 494 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-205ENST00000395721 GCKRQ14397 625 aa11.2□□□□□ -0.62
PTPN20-205ENST00000395721 GPR101Q96P66 508 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-205ENST00000395721 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-205ENST00000395721 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
PTPN20-205ENST00000395721 XDHP47989 1333 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 H7C1D1 291 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 H7C1W4 665 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 ATP2B4P23634 1241 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 GREM2Q9H772 168 aa11.19□□□□□ -0.62
PTPN20-205ENST00000395721 IGHMBP2P38935 993 aaKnown RBP11.18□□□□□ -0.62
PTPN20-205ENST00000395721 CNTNAP1P78357 1384 aa11.18□□□□□ -0.62
PTPN20-205ENST00000395721 PSMD14O00487 310 aa11.18□□□□□ -0.62
PTPN20-205ENST00000395721 PLA2G12BQ9BX93 195 aa11.18□□□□□ -0.62
PTPN20-205ENST00000395721 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
PTPN20-205ENST00000395721 MYH3P11055 1940 aa11.18□□□□□ -0.62
PTPN20-205ENST00000395721 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
PTPN20-205ENST00000395721 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
PTPN20-205ENST00000395721 ABT1Q9ULW3 272 aaKnown RBP11.17□□□□□ -0.62
PTPN20-205ENST00000395721 F6X3S4 739 aa11.17□□□□□ -0.62
PTPN20-205ENST00000395721 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
PTPN20-205ENST00000395721 DPF2Q92785 391 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-205ENST00000395721 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-205ENST00000395721 ZNF521Q96K83 1311 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 E9PSI1 815 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
PTPN20-205ENST00000395721 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
PTPN20-205ENST00000395721 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 ITGA6P23229 1130 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 CASP7P55210 303 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 CHMP3Q9Y3E7 222 aa11.16□□□□□ -0.62
PTPN20-205ENST00000395721 ANKRD18BA2A2Z9 1011 aa11.15□□□□□ -0.62
PTPN20-205ENST00000395721 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
PTPN20-205ENST00000395721 SLC4A10Q6U841 1118 aa11.15□□□□□ -0.62
PTPN20-205ENST00000395721 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
PTPN20-205ENST00000395721 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
PTPN20-205ENST00000395721 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
PTPN20-205ENST00000395721 SPEF2Q9C093 1822 aa11.15□□□□□ -0.62
PTPN20-205ENST00000395721 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.63
PTPN20-205ENST00000395721 MED23Q9ULK4 1368 aa11.15□□□□□ -0.63
PTPN20-205ENST00000395721 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 TRAF5O00463 557 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 KCNJ4P48050 445 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 DEFB115Q30KQ5 88 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 TBC1D10BQ4KMP7 808 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-205ENST00000395721 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-205ENST00000395721 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 CSF1RP07333 972 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
PTPN20-205ENST00000395721 HNRNPUQ00839 825 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTPN20-205ENST00000395721 TAF7LQ5H9L4 462 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 GLIS2Q9BZE0 524 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-205ENST00000395721 LEMD3Q9Y2U8 911 aa11.14□□□□□ -0.63
PTPN20-205ENST00000395721 RASSF10A6NK89 507 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 GRM8O00222 908 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
PTPN20-205ENST00000395721 VEGFBP49765 207 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
PTPN20-205ENST00000395721 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
PTPN20-205ENST00000395721 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 AIDAQ96BJ3 306 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 HIRAP54198 1017 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-205ENST00000395721 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-205ENST00000395721 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-205ENST00000395721 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
PTPN20-205ENST00000395721 PKNOX2Q96KN3 472 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms