RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 EZH2Q15910 746 aaKnown RBP11.79□□□□□ -0.52
PFDN6-205ENST00000395134 ADAM32Q8TC27 787 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 SLIT3O75094 1523 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 CPDO75976 1380 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 GCP02774 474 aa11.78□□□□□ -0.52
PFDN6-205ENST00000395134 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
PFDN6-205ENST00000395134 RNF19BQ6ZMZ0 732 aa11.78□□□□□ -0.52
PFDN6-205ENST00000395134 NLRP13Q86W25 1043 aa11.78□□□□□ -0.52
PFDN6-205ENST00000395134 PIF1Q9H611 641 aa11.78□□□□□ -0.52
PFDN6-205ENST00000395134 PEAK1Q9H792 1746 aa11.77□□□□□ -0.52
PFDN6-205ENST00000395134 PDE3BQ13370 1112 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.53
PFDN6-205ENST00000395134 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 MICAL1Q8TDZ2 1067 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
PFDN6-205ENST00000395134 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 VTI1BQ9UEU0 232 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
PFDN6-205ENST00000395134 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.77□□□□□ -0.53
PFDN6-205ENST00000395134 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 DISP2A7MBM2 1401 aa11.77□□□□□ -0.53
PFDN6-205ENST00000395134 RAB11FIP3O75154 756 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 APBA3O96018 575 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 JUNDP17535 347 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 DNAJA1P31689 397 aaKnown RBP11.76□□□□□ -0.53
PFDN6-205ENST00000395134 MAPK8P45983 427 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 PSMD2Q13200 908 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 BLOC1S3Q6QNY0 202 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
PFDN6-205ENST00000395134 M0R2N6 131 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
PFDN6-205ENST00000395134 TNNI2P48788 182 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 EVX2Q03828 476 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 NBPF14Q5TI25 921 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 TMC1Q8TDI8 760 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 SPACA7Q96KW9 195 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 RABGEF1Q9UJ41 708 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 METRNQ9UJH8 293 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
PFDN6-205ENST00000395134 CRB1P82279 1406 aa11.75□□□□□ -0.53
PFDN6-205ENST00000395134 UTRNP46939 3433 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 EHHADHQ08426 723 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 GPATCH3Q96I76 525 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 DMRTB1Q96MA1 342 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 ARHGAP9Q9BRR9 750 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 PRKD2Q9BZL6 878 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
PFDN6-205ENST00000395134 NFAT5O94916 1531 aa11.74□□□□□ -0.53
PFDN6-205ENST00000395134 GOLGB1Q14789 3259 aaKnown RBP11.73□□□□□ -0.53
PFDN6-205ENST00000395134 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
PFDN6-205ENST00000395134 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
PFDN6-205ENST00000395134 TSEN2Q8NCE0 465 aaKnown RBP11.73□□□□□ -0.53
PFDN6-205ENST00000395134 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
PFDN6-205ENST00000395134 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 MPSTP25325 297 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 ARID5AQ03989 594 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.72□□□□□ -0.53
PFDN6-205ENST00000395134 NLGN1Q8N2Q7 840 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
PFDN6-205ENST00000395134 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
PFDN6-205ENST00000395134 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.53
PFDN6-205ENST00000395134 KTN1Q86UP2 1357 aaKnown RBP11.71□□□□□ -0.53
PFDN6-205ENST00000395134 IGBP1P78318 339 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 PTPROQ16827 1216 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
PFDN6-205ENST00000395134 RGPD2P0DJD1 1756 aa11.71□□□□□ -0.54
PFDN6-205ENST00000395134 USP54Q70EL1 1684 aa11.71□□□□□ -0.54
PFDN6-205ENST00000395134 RNF40O75150 1001 aa11.7□□□□□ -0.54
PFDN6-205ENST00000395134 ATP2B2Q01814 1243 aa11.7□□□□□ -0.54
PFDN6-205ENST00000395134 USP4Q13107 963 aa11.7□□□□□ -0.54
PFDN6-205ENST00000395134 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
PFDN6-205ENST00000395134 METTL14Q9HCE5 456 aaKnown RBP11.7□□□□□ -0.54
PFDN6-205ENST00000395134 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
PFDN6-205ENST00000395134 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 HAX1O00165 279 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
PFDN6-205ENST00000395134 IGFBP4P22692 258 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 DDB1Q16531 1140 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 KCNB2Q92953 911 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 CARD11Q9BXL7 1154 aa11.69□□□□□ -0.54
PFDN6-205ENST00000395134 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
PFDN6-205ENST00000395134 WDR17Q8IZU2 1322 aa11.68□□□□□ -0.54
PFDN6-205ENST00000395134 BTAF1O14981 1849 aa11.68□□□□□ -0.54
PFDN6-205ENST00000395134 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms