RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TMOD3Q9NYL9 352 aa14.5□□□□□ -0.09
RTN1-203ENST00000395090 FMNL1O95466 1100 aaPredicted RBP14.49□□□□□ -0.09
RTN1-203ENST00000395090 HDGFL1Q5TGJ6 251 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 PANK1Q8TE04 598 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 USB1Q9BQ65 265 aaKnown RBP14.49□□□□□ -0.09
RTN1-203ENST00000395090 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 PRM3Q9NNZ6 103 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 GLI3P10071 1580 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 TOGARAM1Q9Y4F4 1720 aa14.49□□□□□ -0.09
RTN1-203ENST00000395090 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
RTN1-203ENST00000395090 BCL9O00512 1426 aa14.48□□□□□ -0.09
RTN1-203ENST00000395090 PTPRCP08575 1304 aa14.48□□□□□ -0.09
RTN1-203ENST00000395090 THSD7AQ9UPZ6 1657 aa14.48□□□□□ -0.09
RTN1-203ENST00000395090 DESI1Q6ICB0 168 aa14.48□□□□□ -0.09
RTN1-203ENST00000395090 THAP11Q96EK4 314 aa14.48□□□□□ -0.09
RTN1-203ENST00000395090 API5Q9BZZ5 524 aaKnown RBP14.48□□□□□ -0.09
RTN1-203ENST00000395090 EIF2S2P20042 333 aaKnown RBP14.47□□□□□ -0.09
RTN1-203ENST00000395090 PTPN5P54829 565 aa14.47□□□□□ -0.09
RTN1-203ENST00000395090 AAMPQ13685 434 aa14.47□□□□□ -0.09
RTN1-203ENST00000395090 ATG3Q9NT62 314 aa14.47□□□□□ -0.09
RTN1-203ENST00000395090 CACNA1FO60840 1977 aa14.46□□□□□ -0.09
RTN1-203ENST00000395090 PRAMEF22A3QJZ6 481 aa14.46□□□□□ -0.09
RTN1-203ENST00000395090 TRAK2O60296 914 aa14.46□□□□□ -0.09
RTN1-203ENST00000395090 COPS2P61201 443 aa14.46□□□□□ -0.09
RTN1-203ENST00000395090 ZNF772Q68DY9 489 aaPredicted RBP14.46□□□□□ -0.09
RTN1-203ENST00000395090 G2E3Q7L622 706 aa14.46□□□□□ -0.09
RTN1-203ENST00000395090 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
RTN1-203ENST00000395090 PAPPAQ13219 1627 aa14.45□□□□□ -0.1
RTN1-203ENST00000395090 MVPQ14764 893 aaKnown RBP14.45□□□□□ -0.1
RTN1-203ENST00000395090 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
RTN1-203ENST00000395090 LRRN4Q8WUT4 740 aa14.45□□□□□ -0.1
RTN1-203ENST00000395090 GDPD2Q9HCC8 539 aa14.45□□□□□ -0.1
RTN1-203ENST00000395090 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
RTN1-203ENST00000395090 ABCC4O15439 1325 aa14.45□□□□□ -0.1
RTN1-203ENST00000395090 KCPQ6ZWJ8 1503 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 HMX1Q9NP08 348 aaPredicted RBP14.44□□□□□ -0.1
RTN1-203ENST00000395090 CHPF2Q9P2E5 772 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 ITGB4P16144 1822 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 RGS12O14924 1447 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 UBR2Q8IWV8 1755 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 SEPT12Q8IYM1 358 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 TMEM57Q8N5G2 664 aa14.44□□□□□ -0.1
RTN1-203ENST00000395090 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
RTN1-203ENST00000395090 INTS3Q68E01 1043 aaKnown RBP14.43□□□□□ -0.1
RTN1-203ENST00000395090 HYPKQ9NX55 129 aa14.43□□□□□ -0.1
RTN1-203ENST00000395090 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
RTN1-203ENST00000395090 TEX13AQ9BXU3 409 aaPredicted RBP14.42□□□□□ -0.1
RTN1-203ENST00000395090 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
RTN1-203ENST00000395090 TBC1D2BQ9UPU7 963 aa14.42□□□□□ -0.1
RTN1-203ENST00000395090 A0A0G2JS52 829 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
RTN1-203ENST00000395090 MYT1Q01538 1121 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 SYTL4Q96C24 671 aaPredicted RBP14.41□□□□□ -0.1
RTN1-203ENST00000395090 ACSBG1Q96GR2 724 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 PHAXQ9H814 394 aaKnown RBP14.41□□□□□ -0.1
RTN1-203ENST00000395090 NDUFB9Q9Y6M9 179 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 KCNQ2O43526 872 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 PROSER3Q2NL68 480 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 LRP10Q7Z4F1 713 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 SPSB2Q99619 263 aa14.41□□□□□ -0.1
RTN1-203ENST00000395090 DOT1LQ8TEK3 1739 aa14.4□□□□□ -0.1
RTN1-203ENST00000395090 ZBTB7BO15156 539 aaPredicted RBP14.4□□□□□ -0.1
RTN1-203ENST00000395090 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
RTN1-203ENST00000395090 ITPRIPQ8IWB1 547 aa14.4□□□□□ -0.1
RTN1-203ENST00000395090 SLC4A9Q96Q91 983 aa14.4□□□□□ -0.1
RTN1-203ENST00000395090 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
RTN1-203ENST00000395090 C5P01031 1676 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 ABL2P42684 1182 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 FKBP5Q13451 457 aaPredicted RBP14.39□□□□□ -0.11
RTN1-203ENST00000395090 LYPD8Q6UX82 237 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 MTRQ99707 1265 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 CHMP4BQ9H444 224 aaKnown RBP14.39□□□□□ -0.11
RTN1-203ENST00000395090 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 KAT6BQ8WYB5 2073 aa14.39□□□□□ -0.11
RTN1-203ENST00000395090 ZPR1O75312 459 aa14.38□□□□□ -0.11
RTN1-203ENST00000395090 ANXA1P04083 346 aa14.38□□□□□ -0.11
RTN1-203ENST00000395090 SMARCC1Q92922 1105 aaPredicted RBP14.38□□□□□ -0.11
RTN1-203ENST00000395090 F6X3S4 739 aa14.37□□□□□ -0.11
RTN1-203ENST00000395090 JUNDP17535 347 aa14.37□□□□□ -0.11
RTN1-203ENST00000395090 CCT4P50991 539 aaKnown RBP14.37□□□□□ -0.11
RTN1-203ENST00000395090 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
RTN1-203ENST00000395090 NBPF14Q5TI25 921 aa14.37□□□□□ -0.11
RTN1-203ENST00000395090 NBPF10Q6P3W6 841 aaKnown RBP14.37□□□□□ -0.11
RTN1-203ENST00000395090 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
RTN1-203ENST00000395090 RGS17Q9UGC6 210 aaPredicted RBP14.37□□□□□ -0.11
RTN1-203ENST00000395090 STARD3NLO95772 234 aa14.37□□□□□ -0.11
RTN1-203ENST00000395090 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
RTN1-203ENST00000395090 KSR2Q6VAB6 950 aa14.36□□□□□ -0.11
RTN1-203ENST00000395090 DNAJC10Q8IXB1 793 aa14.36□□□□□ -0.11
RTN1-203ENST00000395090 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
RTN1-203ENST00000395090 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
RTN1-203ENST00000395090 A1BGP04217 495 aa14.35□□□□□ -0.11
RTN1-203ENST00000395090 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
RTN1-203ENST00000395090 FAM182BQ5T319 152 aa14.35□□□□□ -0.11
RTN1-203ENST00000395090 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
RTN1-203ENST00000395090 FAM160A2Q8N612 972 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms