RNA–Protein interactions for RNA: ENST00000394072.7

TNS4-202, Transcript of tensin 4, humanhuman

TSL 1 (best)

Gene TNS4, Length 2,174 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS4-202ENST00000394072 EVA1CP58658 441 aa13.9□□□□□ -0.18
TNS4-202ENST00000394072 TFCP2Q12800 502 aa13.9□□□□□ -0.18
TNS4-202ENST00000394072 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
TNS4-202ENST00000394072 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
TNS4-202ENST00000394072 TPM3P06753 285 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNS4-202ENST00000394072 KCNJ4P48050 445 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 ANKRD1Q15327 319 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 C17orf53Q8N3J3 647 aaPredicted RBP13.89□□□□□ -0.19
TNS4-202ENST00000394072 FAM227BQ96M60 508 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
TNS4-202ENST00000394072 SPTLC3Q9NUV7 552 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 COL22A1Q8NFW1 1626 aaPredicted RBP13.89□□□□□ -0.19
TNS4-202ENST00000394072 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
TNS4-202ENST00000394072 TRIM28Q13263 835 aaKnown RBP13.89□□□□□ -0.19
TNS4-202ENST00000394072 KRT32Q14532 448 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 HAUS7Q99871 368 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 KIF3AQ9Y496 699 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 LTBP4Q8N2S1 1624 aa13.89□□□□□ -0.19
TNS4-202ENST00000394072 A0A0D9SFI3 127 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 CIAO1O76071 339 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 USPL1Q5W0Q7 1092 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 GIMAP6Q6P9H5 292 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 TMOD3Q9NYL9 352 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 MYH7P12883 1935 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 KAT6BQ8WYB5 2073 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 PALLDQ8WX93 1383 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 SLC27A2O14975 620 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 TSC1Q92574 1164 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 LAMA4Q16363 1823 aa13.88□□□□□ -0.19
TNS4-202ENST00000394072 A1BGP04217 495 aa13.87□□□□□ -0.19
TNS4-202ENST00000394072 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
TNS4-202ENST00000394072 JARID2Q92833 1246 aaPredicted RBP13.87□□□□□ -0.19
TNS4-202ENST00000394072 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
TNS4-202ENST00000394072 GOLGA6L6A8MZA4 724 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 CHAF1AQ13111 956 aaPredicted RBP13.86□□□□□ -0.19
TNS4-202ENST00000394072 ADCK5Q3MIX3 580 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 FUCA2Q9BTY2 467 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 STRN4Q9NRL3 753 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 DISP2A7MBM2 1401 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 SH3TC1Q8TE82 1336 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 TAF5LO75529 589 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 GJB2P29033 226 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
TNS4-202ENST00000394072 ATG9AQ7Z3C6 839 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 CCDC83Q8IWF9 413 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.86□□□□□ -0.19
TNS4-202ENST00000394072 ZNF609O15014 1411 aa13.86□□□□□ -0.19
TNS4-202ENST00000394072 NUP98P52948 1817 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 EYA2O00167 538 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 TCIRG1Q13488 830 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 BLOC1S2Q6QNY1 142 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 DBNDD2Q9BQY9 259 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.85□□□□□ -0.19
TNS4-202ENST00000394072 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
TNS4-202ENST00000394072 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
TNS4-202ENST00000394072 KIAA1524Q8TCG1 905 aa13.85□□□□□ -0.19
TNS4-202ENST00000394072 STARD3NLO95772 234 aa13.84□□□□□ -0.19
TNS4-202ENST00000394072 CPA1P15085 419 aa13.84□□□□□ -0.19
TNS4-202ENST00000394072 RPS6KB1P23443 525 aa13.84□□□□□ -0.19
TNS4-202ENST00000394072 MCMDC2Q4G0Z9 681 aa13.84□□□□□ -0.19
TNS4-202ENST00000394072 MTMR6Q9Y217 621 aa13.84□□□□□ -0.19
TNS4-202ENST00000394072 PDCP20941 246 aa13.83□□□□□ -0.19
TNS4-202ENST00000394072 KIF6Q6ZMV9 814 aa13.83□□□□□ -0.19
TNS4-202ENST00000394072 SPC24Q8NBT2 197 aa13.83□□□□□ -0.19
TNS4-202ENST00000394072 ZBTB3Q9H5J0 574 aa13.83□□□□□ -0.19
TNS4-202ENST00000394072 HELLSQ9NRZ9 838 aa13.83□□□□□ -0.19
TNS4-202ENST00000394072 CHMP3Q9Y3E7 222 aa13.83□□□□□ -0.19
TNS4-202ENST00000394072 VPS37CA5D8V6 355 aaPredicted RBP13.83□□□□□ -0.2
TNS4-202ENST00000394072 AP5Z1O43299 807 aa13.83□□□□□ -0.2
TNS4-202ENST00000394072 LARGE1O95461 756 aa13.83□□□□□ -0.2
TNS4-202ENST00000394072 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
TNS4-202ENST00000394072 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
TNS4-202ENST00000394072 ZNF589Q86UQ0 364 aaPredicted RBP13.83□□□□□ -0.2
TNS4-202ENST00000394072 ABCC12Q96J65 1359 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
TNS4-202ENST00000394072 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 FAM177BA6PVY3 158 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 CBX1P83916 185 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 ME3Q16798 604 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 AKAP2Q9Y2D5 859 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 COL16A1Q07092 1604 aaPredicted RBP13.82□□□□□ -0.2
TNS4-202ENST00000394072 BCL9O00512 1426 aa13.82□□□□□ -0.2
TNS4-202ENST00000394072 ROBO1Q9Y6N7 1651 aa13.81□□□□□ -0.2
TNS4-202ENST00000394072 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
TNS4-202ENST00000394072 HMGB1P09429 215 aaKnown RBP13.81□□□□□ -0.2
TNS4-202ENST00000394072 UTP14CQ5TAP6 766 aaKnown RBP13.81□□□□□ -0.2
TNS4-202ENST00000394072 PIGBQ92521 554 aa13.81□□□□□ -0.2
TNS4-202ENST00000394072 DNAJC2Q99543 621 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms