RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 F13A1P00488 732 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 CYLC1P35663 651 aaPredicted RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 USP48Q86UV5 1035 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 PRAG1Q86YV5 1406 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 ANO6Q4KMQ2 910 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 CCDC175P0C221 793 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 DHX37Q8IY37 1157 aaKnown RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 CALCOCO1Q9P1Z2 691 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 EIF2AK4Q9P2K8 1649 aaKnown RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 PLCH2O75038 1416 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 NPHP3Q7Z494 1330 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 GNAT2P19087 354 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
LAMB1-204ENST00000393561 USP37Q86T82 979 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
LAMB1-204ENST00000393561 CALM1P0DP23 149 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 CALM2P0DP24 149 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 CALM3P0DP25 149 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 DYNC1I1O14576 645 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 FBLN1P23142 703 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
LAMB1-204ENST00000393561 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■■□ 20.2
LAMB1-204ENST00000393561 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 FLT4P35916 1363 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 AFMP43652 599 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 DDX12PQ92771 950 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 PLVAPQ9BX97 442 aa13.36□□□□□ -0.27
LAMB1-204ENST00000393561 FERMT1Q9BQL6 677 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 RNF187Q5TA31 235 aaPredicted RBP13.35□□□□□ -0.27
LAMB1-204ENST00000393561 GIGYF2Q6Y7W6 1299 aaKnown RBP13.35□□□□□ -0.27
LAMB1-204ENST00000393561 MAATS1Q7Z4T9 603 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 A2MP01023 1474 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 PSMA7O14818 248 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 HEATR3Q7Z4Q2 680 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 CCDC97Q96F63 343 aaPredicted RBP13.35□□□□□ -0.27
LAMB1-204ENST00000393561 SPAG5Q96R06 1193 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
LAMB1-204ENST00000393561 BICD1Q96G01 975 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 TUBB4AP04350 444 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
LAMB1-204ENST00000393561 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
LAMB1-204ENST00000393561 GIMAP7Q8NHV1 300 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
LAMB1-204ENST00000393561 RNF113AO15541 343 aaKnown RBP13.34□□□□□ -0.27
LAMB1-204ENST00000393561 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 NF2P35240 595 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
LAMB1-204ENST00000393561 ZNF804AQ7Z570 1209 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 GTPBP4Q9BZE4 634 aaKnown RBP13.34□□□□□ -0.27
LAMB1-204ENST00000393561 RAD50Q92878 1312 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 MAGEB6P1A0A0J9YX57 407 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 SKILP12757 684 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 CALML3P27482 149 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 CEP112Q8N8E3 955 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 PUF60Q9UHX1 559 aaKnown RBP13.34□□□□□ -0.27
LAMB1-204ENST00000393561 TRIM75PA6NK02 468 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 ACTN2P35609 894 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 SPECC1LQ69YQ0 1117 aa13.34□□□□□ -0.27
LAMB1-204ENST00000393561 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
LAMB1-204ENST00000393561 KRT13P13646 458 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 NAPAP54920 295 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 C6orf50Q9HD87 102 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 MAP3K5Q99683 1374 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 SPTLC2O15270 562 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 HSF2BPO75031 334 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
LAMB1-204ENST00000393561 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
LAMB1-204ENST00000393561 AOPEPQ8N6M6 819 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
LAMB1-204ENST00000393561 CTAGE15A4D2H0 777 aa13.32□□□□□ -0.28
LAMB1-204ENST00000393561 CTAGE8P0CG41 777 aa13.32□□□□□ -0.28
LAMB1-204ENST00000393561 CTAGE6Q86UF2 777 aa13.32□□□□□ -0.28
LAMB1-204ENST00000393561 CTAGE4Q8IX94 777 aa13.32□□□□□ -0.28
LAMB1-204ENST00000393561 NIP7Q9Y221 180 aaKnown RBP eCLIP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms