RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 CALR3Q96L12 384 aaKnown RBP3.86□□□□□ -1.79
RNU6-1228P-201ENST00000391014 SAP130Q9H0E3 1048 aa3.86□□□□□ -1.79
RNU6-1228P-201ENST00000391014 MRPL18Q9H0U6 180 aaKnown RBP3.86□□□□□ -1.79
RNU6-1228P-201ENST00000391014 GOLGA2P5Q9HBQ8 144 aa3.86□□□□□ -1.79
RNU6-1228P-201ENST00000391014 PCMTD2Q9NV79 361 aa3.86□□□□□ -1.79
RNU6-1228P-201ENST00000391014 WISP1O95388 367 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 PSAPP07602 524 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 TRIP4Q15650 581 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 CFAP70Q5T0N1 1121 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 TXNDC11Q6PKC3 985 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 CAPN12Q6ZSI9 719 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 ARMC10Q8N2F6 343 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 PRIMPOLQ96LW4 560 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 KCNK4Q9NYG8 393 aa3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 COL17A1Q9UMD9 1497 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1228P-201ENST00000391014 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 LINC01387J3KSC0 135 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 TGFB1P01137 390 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 GHRHP01286 108 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 HOXD8P13378 290 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 ATP11AP98196 1134 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 VTI1AQ96AJ9 217 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 RAXQ9Y2V3 346 aa3.84□□□□□ -1.79
RNU6-1228P-201ENST00000391014 IGLV1-40P01703 118 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 GLB1P16278 677 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 CDC25BP30305 580 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 SOX18P35713 384 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 SLC51AQ86UW1 340 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 NLRP13Q86W25 1043 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 FAM200AQ8TCP9 573 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 LACRTQ9GZZ8 138 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 PPME1Q9Y570 386 aa3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 OAS3Q9Y6K5 1087 aaKnown RBP3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ZBTB39O15060 712 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 DDX3YO15523 660 aaKnown RBP3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 PRMT3O60678 531 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 CYP2E1P05181 493 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ARID4AP29374 1257 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 FAM69CQ0P6D2 419 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 OCLNQ16625 522 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ZDHHC13Q8IUH4 622 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 OR13H1Q8NG92 308 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 SH2B1Q9NRF2 756 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 STOML1Q9UBI4 398 aa3.82□□□□□ -1.8
RNU6-1228P-201ENST00000391014 HMX2A2RU54 273 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 PRR19A6NJB7 356 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 BTBD11A6QL63 1104 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 KIAA1324LA8MWY0 1029 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 TNFRSF10BO14763 440 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 TAL1P17542 331 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 RFX1P22670 979 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 CD68P34810 354 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 CEP135Q66GS9 1140 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 KIAA1211Q6ZU35 1233 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 TRIM42Q8IWZ5 723 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 COL26A1Q96A83 441 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 FMNL2Q96PY5 1086 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 CARD10Q9BWT7 1032 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 RASSF4Q9H2L5 321 aa3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 NOVA2Q9UNW9 492 aaKnown RBP3.81□□□□□ -1.8
RNU6-1228P-201ENST00000391014 A6NJR5 290 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 UBAP1LF5GYI3 381 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ADAM11O75078 769 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 COBLO75128 1261 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 BRD2P25440 801 aaKnown RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 GP2P55259 537 aaKnown RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 NFIAQ12857 509 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 NAA30Q147X3 362 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 C16orf46Q6P387 395 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ACAD11Q709F0 780 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 MAP4K3Q8IVH8 894 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 DCAF11Q8TEB1 546 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 FOXD4L4Q8WXT5 416 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 KLHDC7BQ96G42 594 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 FAM46AQ96IP4 442 aaKnown RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 POP1Q99575 1024 aaKnown RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 MKNK1Q9BUB5 465 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 RBSNQ9H1K0 784 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 C7orf69Q9H7B7 122 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 SRA1Q9HD15 236 aaKnown RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ZNF777Q9ULD5 760 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ZMIZ1Q9ULJ6 1067 aa3.8□□□□□ -1.8
RNU6-1228P-201ENST00000391014 FSCN2O14926 492 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 PTCD1O75127 700 aaKnown RBP3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 SPINK2P20155 84 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 EPHA1P21709 976 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 CDC27P30260 824 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 IRAK1P51617 712 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 UBASH3BQ8TF42 649 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 MUC3BQ9H195 1237 aa3.79□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ACIN1Q9UKV3 1341 aaKnown RBP3.78□□□□□ -1.8
RNU6-1228P-201ENST00000391014 DHX15O43143 795 aaKnown RBP3.78□□□□□ -1.8
RNU6-1228P-201ENST00000391014 PAX4O43316 350 aa3.78□□□□□ -1.8
RNU6-1228P-201ENST00000391014 KIF4AO95239 1232 aa3.78□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ACPPP15309 386 aa3.78□□□□□ -1.8
RNU6-1228P-201ENST00000391014 ZAP70P43403 619 aa3.78□□□□□ -1.8
RNU6-1228P-201ENST00000391014 SRPK2P78362 688 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms