RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 GNAQP50148 359 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 DDX19AQ9NUU7 478 aaKnown RBP15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 SKIDA1Q1XH10 827 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 TRAPPC3LQ5T215 181 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 NAA16Q6N069 864 aaPredicted RBP15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 HDAC9Q9UKV0 1011 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 ARAP3Q8WWN8 1544 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 BMP15O95972 392 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 ZNF397Q8NF99 534 aaPredicted RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 SLC26A6Q9BXS9 759 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 ORC3Q9UBD5 711 aaPredicted RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 ZBTB7BO15156 539 aaPredicted RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 CAVIN2O95810 425 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 ESR2Q92731 530 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 SEC24BO95487 1268 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 GNAT2P19087 354 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 PAF1Q8N7H5 531 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 TSG101Q99816 390 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 PTPRTO14522 1441 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 PLCG2P16885 1265 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 MATR3P43243 847 aaKnown RBP eCLIP15□□□□□ -0.018e-7■■■■□ 20.9
PTPRN2-203ENST00000389418 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 ANKRD2Q9GZV1 360 aa15□□□□□ -0.01
PTPRN2-203ENST00000389418 ZSCAN16Q9H4T2 348 aaPredicted RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 RBM8AQ9Y5S9 174 aaKnown RBP15□□□□□ -0.01
PTPRN2-203ENST00000389418 KLF18A0A0U1RQI7 1052 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 MCMDC2Q4G0Z9 681 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 ZNF335Q9H4Z2 1342 aaPredicted RBP14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 CFAP100Q494V2 611 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 IQCEQ6IPM2 695 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 ZNF804AQ7Z570 1209 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 OGFOD1Q8N543 542 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 HECW2Q9P2P5 1572 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 POTEJP0CG39 1038 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 AMPD3Q01432 767 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 TCP11L1Q9NUJ3 509 aa14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
PTPRN2-203ENST00000389418 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 KANK3Q6NY19 840 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 INSRP06213 1382 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 NMIQ13287 307 aaPredicted RBP14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 LRRC27Q9C0I9 530 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 KIF2AO00139 706 aaPredicted RBP14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 APBA3O96018 575 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 ZSCAN30Q86W11 494 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 ZKSCAN3Q9BRR0 538 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 SEPT11Q9NVA2 429 aaKnown RBP14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 CNBD1Q8NA66 436 aa14.98□□□□□ -0.01
PTPRN2-203ENST00000389418 CCDC129Q6ZRS4 1044 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 KDM6BO15054 1643 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 RBM10P98175 930 aaKnown RBP14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 MAGEB6Q8N7X4 407 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 CCDC112Q8NEF3 446 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 SCLT1Q96NL6 688 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 USP19O94966 1318 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 ADCY10Q96PN6 1610 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 FKBP15Q5T1M5 1219 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 DBNDD2Q9BQY9 259 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 PAG1Q9NWQ8 432 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 IDEP14735 1019 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 CCDC181Q5TID7 509 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 FSIP1Q8NA03 581 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 USP25Q9UHP3 1055 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 GJA3Q9Y6H8 435 aa14.97□□□□□ -0.01
PTPRN2-203ENST00000389418 CHL1O00533 1208 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 EPB41L2O43491 1005 aaKnown RBP14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 WTAPQ15007 396 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 IL17REQ8NFR9 667 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 MPHOSPH6Q99547 160 aaKnown RBP14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 MCM9Q9NXL9 1143 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 ITGA6P23229 1130 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 NBPF14Q5TI25 921 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 EYA3Q99504 573 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 RAD50Q92878 1312 aa14.96□□□□□ -0.01
PTPRN2-203ENST00000389418 CALML4Q96GE6 196 aa14.96□□□□□ -0.02
PTPRN2-203ENST00000389418 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.02
PTPRN2-203ENST00000389418 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 PRDM1O75626 825 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 CCDC148Q8NFR7 591 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 SPATA31E1Q6ZUB1 1445 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 HSP90AA4PQ58FG1 418 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 EDC3Q96F86 508 aaKnown RBP14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 VPS36Q86VN1 386 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 TSPY3P0CV98 308 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 TSPY8P0CW00 308 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 RBM25P49756 843 aaKnown RBP14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 PRKG1Q13976 671 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 KLHL40Q2TBA0 621 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 CNNM3Q8NE01 707 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms