RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 STK3Q13188 491 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
LTN1-203ENST00000389195 SEPT12Q8IYM1 358 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 ZNF609O15014 1411 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 HAUS7Q99871 368 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 ZDHHC9Q9Y397 364 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 NUP98P52948 1817 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 PLEKHG2Q9H7P9 1386 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 COL4A1P02462 1669 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 ANKRD18BA2A2Z9 1011 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 PHKA1P46020 1223 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 STK11IPQ8N1F8 1099 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 QTRT2Q9H974 415 aaKnown RBP12.23□□□□□ -0.45
LTN1-203ENST00000389195 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
LTN1-203ENST00000389195 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 HAND2P61296 217 aa12.23□□□□□ -0.45
LTN1-203ENST00000389195 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
LTN1-203ENST00000389195 M0R2C6 588 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 SLC27A2O14975 620 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 PDE8AO60658 829 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 GTF2E1P29083 439 aaPredicted RBP12.22□□□□□ -0.45
LTN1-203ENST00000389195 MCAMP43121 646 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 GDPD2Q9HCC8 539 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 TRIM37O94972 964 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 GSE1Q14687 1217 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 RAB3GAP1Q15042 981 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
LTN1-203ENST00000389195 MCTP1Q6DN14 999 aa12.21□□□□□ -0.45
LTN1-203ENST00000389195 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
LTN1-203ENST00000389195 OSBP2Q969R2 916 aa12.21□□□□□ -0.45
LTN1-203ENST00000389195 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
LTN1-203ENST00000389195 BCAMP50895 628 aa12.21□□□□□ -0.46
LTN1-203ENST00000389195 CCDC83Q8IWF9 413 aa12.21□□□□□ -0.46
LTN1-203ENST00000389195 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.46
LTN1-203ENST00000389195 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.46
LTN1-203ENST00000389195 ERVV-1B6SEH8 477 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
LTN1-203ENST00000389195 NTSR2O95665 410 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 CYP21A2P08686 494 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
LTN1-203ENST00000389195 INCENPQ9NQS7 918 aa12.2□□□□□ -0.46
LTN1-203ENST00000389195 TRAK2O60296 914 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 CCDC158Q5M9N0 1113 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 TTC14Q96N46 770 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
LTN1-203ENST00000389195 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 NPHP1O15259 732 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 PDE8BO95263 885 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
LTN1-203ENST00000389195 KLRK1P26718 216 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 FOSBP53539 338 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 ME3Q16798 604 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 MCMDC2Q4G0Z9 681 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
LTN1-203ENST00000389195 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
LTN1-203ENST00000389195 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
LTN1-203ENST00000389195 CCDC102BQ68D86 513 aa12.18□□□□□ -0.46
LTN1-203ENST00000389195 VGLL2Q8N8G2 317 aa12.18□□□□□ -0.46
LTN1-203ENST00000389195 PLA2G12BQ9BX93 195 aa12.18□□□□□ -0.46
LTN1-203ENST00000389195 PIH1D3Q9NQM4 214 aaKnown RBP12.18□□□□□ -0.46
LTN1-203ENST00000389195 CIAO1O76071 339 aa12.18□□□□□ -0.46
LTN1-203ENST00000389195 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
LTN1-203ENST00000389195 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
LTN1-203ENST00000389195 MAST3O60307 1309 aa12.18□□□□□ -0.46
LTN1-203ENST00000389195 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
LTN1-203ENST00000389195 GYG1P46976 350 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
LTN1-203ENST00000389195 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
LTN1-203ENST00000389195 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 SMIM22K7EJ46 135 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 KDM4AO75164 1064 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 ZKSCAN1P17029 563 aaPredicted RBP12.17□□□□□ -0.46
LTN1-203ENST00000389195 ANAPC15P60006 121 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 MED23Q9ULK4 1368 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 NSFL1CQ9UNZ2 370 aaKnown RBP12.17□□□□□ -0.46
LTN1-203ENST00000389195 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
LTN1-203ENST00000389195 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 CYP46A1Q9Y6A2 500 aa12.17□□□□□ -0.46
LTN1-203ENST00000389195 MYO5AQ9Y4I1 1855 aaKnown RBP12.16□□□□□ -0.46
LTN1-203ENST00000389195 FOXP2O15409 715 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms