RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 CIZ1Q9ULV3 898 aaPredicted RBP18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 LAMB2P55268 1798 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 GOLIM4O00461 696 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 CCDC152Q4G0S7 254 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 SMIM5Q71RC9 77 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
RAB3IP-204ENST00000378815 PDE8BO95263 885 aa18.55■□□□□ 0.56
RAB3IP-204ENST00000378815 MCM2P49736 904 aa18.55■□□□□ 0.56
RAB3IP-204ENST00000378815 RTCBQ9Y3I0 505 aaKnown RBP18.55■□□□□ 0.56
RAB3IP-204ENST00000378815 NECTIN1Q15223 517 aa18.55■□□□□ 0.56
RAB3IP-204ENST00000378815 GORABQ5T7V8 394 aa18.55■□□□□ 0.56
RAB3IP-204ENST00000378815 MROH5Q6ZUA9 1318 aa18.55■□□□□ 0.56
RAB3IP-204ENST00000378815 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 USPL1Q5W0Q7 1092 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 TBC1D9BQ66K14 1250 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 ZNF589Q86UQ0 364 aaPredicted RBP18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 SPEF2Q9C093 1822 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 TTC39AQ5SRH9 613 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
RAB3IP-204ENST00000378815 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
RAB3IP-204ENST00000378815 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
RAB3IP-204ENST00000378815 TAF5LO75529 589 aa18.53■□□□□ 0.56
RAB3IP-204ENST00000378815 ERFEQ4G0M1 354 aa18.53■□□□□ 0.56
RAB3IP-204ENST00000378815 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
RAB3IP-204ENST00000378815 ZPR1O75312 459 aa18.52■□□□□ 0.56
RAB3IP-204ENST00000378815 CHGBP05060 677 aa18.52■□□□□ 0.56
RAB3IP-204ENST00000378815 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.56
RAB3IP-204ENST00000378815 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
RAB3IP-204ENST00000378815 ZNF512BQ96KM6 892 aaPredicted RBP18.52■□□□□ 0.56
RAB3IP-204ENST00000378815 C4BP0C0L5 1744 aa18.52■□□□□ 0.56
RAB3IP-204ENST00000378815 FGFR2P21802 821 aa18.52■□□□□ 0.55
RAB3IP-204ENST00000378815 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.55
RAB3IP-204ENST00000378815 MCMDC2Q4G0Z9 681 aa18.52■□□□□ 0.55
RAB3IP-204ENST00000378815 ARHGEF1Q92888 912 aaKnown RBP18.52■□□□□ 0.55
RAB3IP-204ENST00000378815 SCARF1Q14162 830 aa18.51■□□□□ 0.55
RAB3IP-204ENST00000378815 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
RAB3IP-204ENST00000378815 CREB3L3Q68CJ9 461 aa18.51■□□□□ 0.55
RAB3IP-204ENST00000378815 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
RAB3IP-204ENST00000378815 MPHOSPH8Q99549 860 aa18.51■□□□□ 0.55
RAB3IP-204ENST00000378815 LRRC4BQ9NT99 713 aa18.51■□□□□ 0.55
RAB3IP-204ENST00000378815 SF3B3Q15393 1217 aaKnown RBP18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 TMX3Q96JJ7 454 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 TTC14Q96N46 770 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 FKBP4Q02790 459 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 ZMYM1Q5SVZ6 1142 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 LPIN2Q92539 896 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 SETDB2Q96T68 719 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 SEC62Q99442 399 aaKnown RBP18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 TM6SF1Q9BZW5 370 aa18.5■□□□□ 0.55
RAB3IP-204ENST00000378815 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 KCNJ4P48050 445 aa18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 NYXQ9GZU5 481 aa18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 COL24A1Q17RW2 1714 aa18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 SLC27A2O14975 620 aa18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 ZKSCAN1P17029 563 aaPredicted RBP18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 SSFA2P28290 1259 aa18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 HELBQ8NG08 1087 aaPredicted RBP18.49■□□□□ 0.55
RAB3IP-204ENST00000378815 RNF113AO15541 343 aaKnown RBP18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 RAB3GAP1Q15042 981 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 ZAP70P43403 619 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 CUL4AQ13619 759 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 ADCK5Q3MIX3 580 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 RNF20Q5VTR2 975 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 CCDC129Q6ZRS4 1044 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 ZSWIM6Q9HCJ5 1215 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 BRWD3Q6RI45 1802 aa18.48■□□□□ 0.55
RAB3IP-204ENST00000378815 MCAMP43121 646 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 HMG20BQ9P0W2 317 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 RPAP1Q9BWH6 1393 aaPredicted RBP18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 CASTP20810 708 aaKnown RBP18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 RFC4P35249 363 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 LRRFIP1Q32MZ4 808 aaKnown RBP18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 SLFNL1Q499Z3 407 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 SLC27A3Q5K4L6 730 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 CCDC102BQ68D86 513 aa18.47■□□□□ 0.55
RAB3IP-204ENST00000378815 C4AP0C0L4 1744 aa18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 ARAP2Q8WZ64 1704 aa18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 SLC5A1P13866 664 aa18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 ADRA2BP18089 450 aa18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 PI16Q6UXB8 463 aa18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 NBPF5PQ86XG9 351 aaPredicted RBP18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 COL4A1P02462 1669 aa18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 ZFYP08048 801 aaPredicted RBP18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
RAB3IP-204ENST00000378815 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms