RNA–Protein interactions for RNA: ENST00000378371.6

ARHGEF16-201, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF16, Length 2,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-201ENST00000378371 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
ARHGEF16-201ENST00000378371 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
ARHGEF16-201ENST00000378371 BOLA2Q9H3K6 86 aa17.97■□□□□ 0.47
ARHGEF16-201ENST00000378371 FAM53CQ9NYF3 392 aa17.97■□□□□ 0.47
ARHGEF16-201ENST00000378371 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
ARHGEF16-201ENST00000378371 BTBD11A6QL63 1104 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 SLFN14P0C7P3 912 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 TAF3Q5VWG9 929 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 BICC1Q9H694 974 aaKnown RBP17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 RFX7Q2KHR2 1363 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 ERBB3P21860 1342 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 GRM8O00222 908 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 PTPN14Q15678 1187 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
ARHGEF16-201ENST00000378371 SKILP12757 684 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 KMT5BQ4FZB7 885 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 NBPF6Q5VWK0 638 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 ZNF771Q7L3S4 317 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 DHX40Q8IX18 779 aaKnown RBP17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 ZNF592Q92610 1267 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 NBPF4Q96M43 638 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 H3BQV1 296 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 TEFQ10587 303 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 SLFNL1Q499Z3 407 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 DDX11Q96FC9 970 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 GOLPH3LQ9H4A5 285 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 RCOR1Q9UKL0 485 aa17.95■□□□□ 0.46
ARHGEF16-201ENST00000378371 SIPA1L3O60292 1781 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 ABCC6O95255 1503 aa17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 ATF3P18847 181 aa17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 SNW1Q13573 536 aaKnown RBP17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 NAA16Q6N069 864 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 Q6ZUG5 572 aa17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 CCAR1Q8IX12 1150 aaKnown RBP17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 CCAR2Q8N163 923 aaKnown RBP17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 KRT222Q8N1A0 295 aa17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 XIRP1Q702N8 1843 aaKnown RBP17.94■□□□□ 0.46
ARHGEF16-201ENST00000378371 PXDNQ92626 1479 aa17.93■□□□□ 0.46
ARHGEF16-201ENST00000378371 LLPHQ9BRT6 129 aaKnown RBP17.93■□□□□ 0.46
ARHGEF16-201ENST00000378371 USP16Q9Y5T5 823 aa17.93■□□□□ 0.46
ARHGEF16-201ENST00000378371 SCRN1Q12765 414 aa17.92■□□□□ 0.46
ARHGEF16-201ENST00000378371 ENGASEQ8NFI3 743 aa17.92■□□□□ 0.46
ARHGEF16-201ENST00000378371 LAMA4Q16363 1823 aa17.92■□□□□ 0.46
ARHGEF16-201ENST00000378371 ZNF609O15014 1411 aa17.92■□□□□ 0.46
ARHGEF16-201ENST00000378371 ANO10Q9NW15 660 aa17.92■□□□□ 0.46
ARHGEF16-201ENST00000378371 RGPD5Q99666 1765 aa17.92■□□□□ 0.46
ARHGEF16-201ENST00000378371 PFKFB2O60825 505 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 TERF2Q15554 542 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 ZNF530Q6P9A1 599 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 FBXO38Q6PIJ6 1188 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 BECN2A8MW95 431 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 KIF2AO00139 706 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 HSP90B1P14625 803 aaKnown RBP17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 ATL3Q6DD88 541 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 CADPS2Q86UW7 1296 aa17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 NSUN7Q8NE18 718 aaKnown RBP17.91■□□□□ 0.46
ARHGEF16-201ENST00000378371 RNMTO43148 476 aaKnown RBP17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 SLU7O95391 586 aaKnown RBP17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 GSDMDP57764 484 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 FAM160A1Q05DH4 1040 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 EDC3Q96F86 508 aaKnown RBP17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 FTOQ9C0B1 505 aaKnown RBP eCLIP17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 SIL1Q9H173 461 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 CYP21A2P08686 494 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 ATP5JP18859 108 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 ELF2Q15723 593 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 MPRIPQ6WCQ1 1025 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 FILIP1Q7Z7B0 1213 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 CEP57L1Q8IYX8 460 aa17.9■□□□□ 0.46
ARHGEF16-201ENST00000378371 STRCQ7RTU9 1775 aa17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 ADAMTS7Q9UKP4 1686 aa17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 KINO60870 393 aaKnown RBP17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 CEBPZQ03701 1054 aaKnown RBP17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 ANKRD24Q8TF21 1146 aa17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 USP28Q96RU2 1077 aa17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 COL18A1P39060 1754 aa17.89■□□□□ 0.45
ARHGEF16-201ENST00000378371 CTDNEP1O95476 244 aa17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 LMOD2Q6P5Q4 547 aa17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 TRMT1Q9NXH9 659 aaKnown RBP17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 IMPACTQ9P2X3 320 aa17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 V9GYY5 206 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 SALL1Q9NSC2 1324 aa17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
ARHGEF16-201ENST00000378371 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms