RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 USP31Q70CQ4 1352 aa14.9□□□□□ -0.02
DDR1-226ENST00000376569 GJB4Q9NTQ9 266 aa14.9□□□□□ -0.02
DDR1-226ENST00000376569 RAI14Q9P0K7 980 aa14.9□□□□□ -0.02
DDR1-226ENST00000376569 RPS6KB1P23443 525 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 AKAP17AQ02040 695 aaKnown RBP14.89□□□□□ -0.03
DDR1-226ENST00000376569 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
DDR1-226ENST00000376569 CDC42BPGQ6DT37 1551 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 EXOC5O00471 708 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 HOXB7P09629 217 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 ZNF165P49910 485 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 ATP2B3Q16720 1220 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 FSIP1Q8NA03 581 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 C16orf45Q96MC5 204 aaPredicted RBP14.89□□□□□ -0.03
DDR1-226ENST00000376569 ORC3Q9UBD5 711 aaPredicted RBP14.89□□□□□ -0.03
DDR1-226ENST00000376569 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
DDR1-226ENST00000376569 A0A0G2JLW4 131 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 PTPN12Q05209 780 aaKnown RBP14.88□□□□□ -0.03
DDR1-226ENST00000376569 SMIM5Q71RC9 77 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 PDILTQ8N807 584 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 C8orf76Q96K31 380 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.88□□□□□ -0.031e-7■■■□□ 14.9
DDR1-226ENST00000376569 ZAP70P43403 619 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 CCAR2Q8N163 923 aaKnown RBP14.88□□□□□ -0.03
DDR1-226ENST00000376569 PLBD2Q8NHP8 589 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 TPD52L1Q16890 204 aaPredicted RBP14.88□□□□□ -0.03
DDR1-226ENST00000376569 TTC6Q86TZ1 520 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 CCAR1Q8IX12 1150 aaKnown RBP14.88□□□□□ -0.03
DDR1-226ENST00000376569 KDRP35968 1356 aa14.88□□□□□ -0.03
DDR1-226ENST00000376569 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
DDR1-226ENST00000376569 RGS12O14924 1447 aa14.87□□□□□ -0.03
DDR1-226ENST00000376569 CYP21A2P08686 494 aa14.87□□□□□ -0.03
DDR1-226ENST00000376569 ZNF445P59923 1031 aa14.87□□□□□ -0.03
DDR1-226ENST00000376569 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
DDR1-226ENST00000376569 SCAND2PQ9GZW5 306 aaPredicted RBP14.87□□□□□ -0.03
DDR1-226ENST00000376569 ANKRD18BA2A2Z9 1011 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 EYA2O00167 538 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 IL15P40933 162 aaPredicted RBP14.86□□□□□ -0.03
DDR1-226ENST00000376569 FAM182BQ5T319 152 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 XAGE2Q96GT9 111 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■■■□ 25.7
DDR1-226ENST00000376569 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 A0A1B0GVL5 298 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 CMTR1Q8N1G2 835 aaKnown RBP14.86□□□□□ -0.03
DDR1-226ENST00000376569 TMX1Q9H3N1 280 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 SLAIN2Q9P270 581 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 ERICH2A1L162 156 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 CDK11BP21127 795 aaKnown RBP14.86□□□□□ -0.03
DDR1-226ENST00000376569 CCDC186Q7Z3E2 898 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 UBE2Q2Q8WVN8 375 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 KAZALD1Q96I82 304 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 DLC1Q96QB1 1528 aa14.86□□□□□ -0.03
DDR1-226ENST00000376569 hCG_1642624A0A1W2PR95 340 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 IRS4O14654 1257 aaPredicted RBP14.85□□□□□ -0.03
DDR1-226ENST00000376569 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 NAPBQ9H115 298 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 RICTORQ6R327 1708 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 CUL4AQ13619 759 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 PRC1O43663 620 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 ITGA6P23229 1130 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 MAP4K1Q92918 833 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 ZSWIM6Q9HCJ5 1215 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 ZKSCAN5Q9Y2L8 839 aa14.85□□□□□ -0.03
DDR1-226ENST00000376569 PTGS1P23219 599 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 TYRO3Q06418 890 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
DDR1-226ENST00000376569 INCENPQ9NQS7 918 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 IFIT3O14879 490 aaKnown RBP14.84□□□□□ -0.03
DDR1-226ENST00000376569 LETM1O95202 739 aaPredicted RBP14.84□□□□□ -0.03
DDR1-226ENST00000376569 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 NBPF14Q5TI25 921 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 NBPF10Q6P3W6 841 aaKnown RBP14.84□□□□□ -0.03
DDR1-226ENST00000376569 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
DDR1-226ENST00000376569 NBPF15Q8N660 670 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 PHKBQ93100 1093 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
DDR1-226ENST00000376569 AKAP2Q9Y2D5 859 aa14.84□□□□□ -0.03
DDR1-226ENST00000376569 B4E1Z4 1266 aa14.83□□□□□ -0.03
DDR1-226ENST00000376569 RNF113AO15541 343 aaKnown RBP14.83□□□□□ -0.03
DDR1-226ENST00000376569 DHX16O60231 1041 aaKnown RBP14.83□□□□□ -0.03
DDR1-226ENST00000376569 PTPN21Q16825 1174 aa14.83□□□□□ -0.03
DDR1-226ENST00000376569 DHX32Q7L7V1 743 aaKnown RBP14.83□□□□□ -0.03
DDR1-226ENST00000376569 RIMS1Q86UR5 1692 aaKnown RBP14.83□□□□□ -0.04
DDR1-226ENST00000376569 CCDC69A6NI79 296 aa14.83□□□□□ -0.04
DDR1-226ENST00000376569 RANBP6O60518 1105 aaKnown RBP14.83□□□□□ -0.04
DDR1-226ENST00000376569 NR1I2O75469 434 aa14.83□□□□□ -0.04
DDR1-226ENST00000376569 ATP6V1AP38606 617 aa14.83□□□□□ -0.04
DDR1-226ENST00000376569 NRDCO43847 1150 aa14.83□□□□□ -0.04
DDR1-226ENST00000376569 NECTIN1Q15223 517 aa14.83□□□□□ -0.04
DDR1-226ENST00000376569 CTNNA3Q9UI47 895 aa14.83□□□□□ -0.04
DDR1-226ENST00000376569 PRDM1O75626 825 aa14.82□□□□□ -0.04
DDR1-226ENST00000376569 ATP5JP18859 108 aa14.82□□□□□ -0.04
DDR1-226ENST00000376569 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
DDR1-226ENST00000376569 CLIP2Q9UDT6 1046 aa14.82□□□□□ -0.04
DDR1-226ENST00000376569 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms