RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
H2AFX-201ENST00000375167 KCNQ5Q9NR82 932 aa23.23■■□□□ 1.31
H2AFX-201ENST00000375167 NSFL1CQ9UNZ2 370 aaKnown RBP23.23■■□□□ 1.31
H2AFX-201ENST00000375167 BRCA2P51587 3418 aa23.22■■□□□ 1.31
H2AFX-201ENST00000375167 SCN9AQ15858 1988 aa23.22■■□□□ 1.31
H2AFX-201ENST00000375167 PRKAR2BP31323 418 aa23.22■■□□□ 1.31
H2AFX-201ENST00000375167 DOK7Q18PE1 504 aa23.22■■□□□ 1.31
H2AFX-201ENST00000375167 ERO1AQ96HE7 468 aa23.22■■□□□ 1.31
H2AFX-201ENST00000375167 EYA3Q99504 573 aa23.22■■□□□ 1.31
H2AFX-201ENST00000375167 ZNF609O15014 1411 aa23.21■■□□□ 1.31
H2AFX-201ENST00000375167 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
H2AFX-201ENST00000375167 ZNF280AP59817 542 aaPredicted RBP23.21■■□□□ 1.31
H2AFX-201ENST00000375167 HCLS1P14317 486 aaPredicted RBP23.2■■□□□ 1.3
H2AFX-201ENST00000375167 NF2P35240 595 aa23.2■■□□□ 1.3
H2AFX-201ENST00000375167 MNX1P50219 401 aaPredicted RBP23.2■■□□□ 1.3
H2AFX-201ENST00000375167 TAF7Q15545 349 aaPredicted RBP23.18■■□□□ 1.3
H2AFX-201ENST00000375167 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
H2AFX-201ENST00000375167 AGBL3Q8NEM8 1001 aa23.17■■□□□ 1.3
H2AFX-201ENST00000375167 RBM27Q9P2N5 1060 aaKnown RBP23.17■■□□□ 1.3
H2AFX-201ENST00000375167 POLLQ9UGP5 575 aa23.17■■□□□ 1.3
H2AFX-201ENST00000375167 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
H2AFX-201ENST00000375167 A0A0C4DFX4 3053 aa23.16■■□□□ 1.3
H2AFX-201ENST00000375167 DCTN1Q14203 1278 aa23.16■■□□□ 1.3
H2AFX-201ENST00000375167 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
H2AFX-201ENST00000375167 EFCC1Q9HA90 598 aa23.16■■□□□ 1.3
H2AFX-201ENST00000375167 MYOZ2Q9NPC6 264 aa23.16■■□□□ 1.3
H2AFX-201ENST00000375167 G3V3G9 751 aa23.15■■□□□ 1.3
H2AFX-201ENST00000375167 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
H2AFX-201ENST00000375167 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
H2AFX-201ENST00000375167 CD99L2Q8TCZ2 262 aa23.15■■□□□ 1.3
H2AFX-201ENST00000375167 ZNF333Q96JL9 665 aa23.15■■□□□ 1.3
H2AFX-201ENST00000375167 SCAF8Q9UPN6 1271 aaKnown RBP23.15■■□□□ 1.3
H2AFX-201ENST00000375167 PSME4Q14997 1843 aa23.15■■□□□ 1.3
H2AFX-201ENST00000375167 MANSC4A6NHS7 340 aaPredicted RBP23.14■■□□□ 1.3
H2AFX-201ENST00000375167 INHBEP58166 350 aa23.14■■□□□ 1.3
H2AFX-201ENST00000375167 EIF4G2P78344 907 aaKnown RBP eCLIP23.14■■□□□ 1.3
H2AFX-201ENST00000375167 SPRYD7Q5W111 196 aa23.14■■□□□ 1.3
H2AFX-201ENST00000375167 RSBN1LQ6PCB5 846 aaPredicted RBP23.14■■□□□ 1.3
H2AFX-201ENST00000375167 ARMC9Q7Z3E5 817 aa23.14■■□□□ 1.3
H2AFX-201ENST00000375167 IFNL1Q8IU54 200 aa23.14■■□□□ 1.3
H2AFX-201ENST00000375167 MIS18AQ9NYP9 233 aa23.14■■□□□ 1.3
H2AFX-201ENST00000375167 ERBB4Q15303 1308 aa23.14■■□□□ 1.29
H2AFX-201ENST00000375167 GPSM2P81274 684 aa23.14■■□□□ 1.29
H2AFX-201ENST00000375167 PTPN12Q05209 780 aaKnown RBP23.14■■□□□ 1.29
H2AFX-201ENST00000375167 SLC4A8Q2Y0W8 1093 aa23.14■■□□□ 1.29
H2AFX-201ENST00000375167 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
H2AFX-201ENST00000375167 HTATSF1O43719 755 aaKnown RBP23.13■■□□□ 1.29
H2AFX-201ENST00000375167 USP17L8P0C7I0 530 aa23.13■■□□□ 1.29
H2AFX-201ENST00000375167 ZC3H12CQ9C0D7 883 aaKnown RBP23.13■■□□□ 1.29
H2AFX-201ENST00000375167 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
H2AFX-201ENST00000375167 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
H2AFX-201ENST00000375167 NBPF11Q86T75 865 aa23.12■■□□□ 1.29
H2AFX-201ENST00000375167 TRMT112Q9UI30 125 aaKnown RBP23.12■■□□□ 1.29
H2AFX-201ENST00000375167 COL6A3P12111 3177 aa23.11■■□□□ 1.29
H2AFX-201ENST00000375167 SLC9C1Q4G0N8 1177 aa23.11■■□□□ 1.29
H2AFX-201ENST00000375167 HSP90AB3PQ58FF7 597 aa23.11■■□□□ 1.29
H2AFX-201ENST00000375167 TBC1D16Q8TBP0 767 aa23.11■■□□□ 1.29
H2AFX-201ENST00000375167 PNISRQ8TF01 805 aaKnown RBP23.11■■□□□ 1.29
H2AFX-201ENST00000375167 LAMB1P07942 1786 aa23.11■■□□□ 1.29
H2AFX-201ENST00000375167 RANBP2P49792 3224 aaKnown RBP23.1■■□□□ 1.29
H2AFX-201ENST00000375167 NLRP10Q86W26 655 aa23.1■■□□□ 1.29
H2AFX-201ENST00000375167 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
H2AFX-201ENST00000375167 PRKG1Q13976 671 aa23.08■■□□□ 1.29
H2AFX-201ENST00000375167 IGF2BP3O00425 579 aaKnown RBP eCLIP23.07■■□□□ 1.28
H2AFX-201ENST00000375167 EIF4A1P60842 406 aaKnown RBP23.07■■□□□ 1.28
H2AFX-201ENST00000375167 GMLQ99445 158 aa23.07■■□□□ 1.28
H2AFX-201ENST00000375167 ZBTB48P10074 688 aaPredicted RBP23.06■■□□□ 1.28
H2AFX-201ENST00000375167 SP3Q02447 781 aa23.06■■□□□ 1.28
H2AFX-201ENST00000375167 CRHR2Q13324 411 aa23.06■■□□□ 1.28
H2AFX-201ENST00000375167 NBPF9Q3BBW0 867 aa23.06■■□□□ 1.28
H2AFX-201ENST00000375167 LDLRAD1Q5T700 205 aa23.06■■□□□ 1.28
H2AFX-201ENST00000375167 OTUD7BQ6GQQ9 843 aa23.06■■□□□ 1.28
H2AFX-201ENST00000375167 DPF3Q92784 378 aa23.06■■□□□ 1.28
H2AFX-201ENST00000375167 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
H2AFX-201ENST00000375167 ANGEL1Q9UNK9 670 aaKnown RBP23.05■■□□□ 1.28
H2AFX-201ENST00000375167 UFL1O94874 794 aa23.04■■□□□ 1.28
H2AFX-201ENST00000375167 ARHGEF6Q15052 776 aa23.04■■□□□ 1.28
H2AFX-201ENST00000375167 SLC10A4Q96EP9 437 aa23.04■■□□□ 1.28
H2AFX-201ENST00000375167 CFAP53Q96M91 514 aa23.03■■□□□ 1.28
H2AFX-201ENST00000375167 PTCH2Q9Y6C5 1203 aa23.03■■□□□ 1.28
H2AFX-201ENST00000375167 COL4A1P02462 1669 aa23.02■■□□□ 1.28
H2AFX-201ENST00000375167 PODXL2Q9NZ53 605 aa23.02■■□□□ 1.28
H2AFX-201ENST00000375167 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.02■■□□□ 1.28
H2AFX-201ENST00000375167 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
H2AFX-201ENST00000375167 MYCP01106 439 aaPredicted RBP23.01■■□□□ 1.27
H2AFX-201ENST00000375167 LRP10Q7Z4F1 713 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 WNK4Q96J92 1243 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 PRO3102Q9H379 93 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 ANKIB1Q9P2G1 1089 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 GGA1Q9UJY5 639 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 A0A1W2PPC1 479 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 USP17L3A6NCW0 530 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 USP17L4A6NCW7 530 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 U2AF1L5P0DN76 240 aaPredicted RBP23.01■■□□□ 1.27
H2AFX-201ENST00000375167 U2AF1Q01081 240 aaKnown RBP eCLIP23.01■■□□□ 1.27
H2AFX-201ENST00000375167 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
H2AFX-201ENST00000375167 USP17L1Q7RTZ2 530 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 APOBEC3FQ8IUX4 373 aaKnown RBP23.01■■□□□ 1.27
H2AFX-201ENST00000375167 OGFOD1Q8N543 542 aa23.01■■□□□ 1.27
H2AFX-201ENST00000375167 WNT10BO00744 389 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms