RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MCM4P33991 863 aa21.67■■□□□ 1.06
HLA-DQB1-201ENST00000374943 RC3H1Q5TC82 1133 aaKnown RBP21.67■■□□□ 1.06
HLA-DQB1-201ENST00000374943 FOXD4L1Q9NU39 408 aa21.67■■□□□ 1.06
HLA-DQB1-201ENST00000374943 PAG1Q9NWQ8 432 aa21.67■■□□□ 1.06
HLA-DQB1-201ENST00000374943 NTSR2O95665 410 aa21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 LDHAL6AQ6ZMR3 332 aa21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 TTC14Q96N46 770 aa21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 RBM8AQ9Y5S9 174 aaKnown RBP21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 A0A1B0GUL6 1792 aa21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 IFIT1P09914 478 aaKnown RBP21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 VGLL2Q8N8G2 317 aa21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 UPF3BQ9BZI7 483 aaKnown RBP21.66■■□□□ 1.06
HLA-DQB1-201ENST00000374943 RBM6P78332 1123 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 CCDC158Q5M9N0 1113 aa21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 PRPF40BQ6NWY9 871 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 DDX46Q7L014 1031 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 XAGE2Q96GT9 111 aa21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 INTS4Q96HW7 963 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 QTRT2Q9H974 415 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 NIP7Q9Y221 180 aaKnown RBP eCLIP21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 NDUFB9Q9Y6M9 179 aa21.65■■□□□ 1.06
HLA-DQB1-201ENST00000374943 NUCB2P80303 420 aa21.64■■□□□ 1.05
HLA-DQB1-201ENST00000374943 METTL24Q5JXM2 366 aa21.64■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CREB3L3Q68CJ9 461 aa21.64■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ZNF589Q86UQ0 364 aaPredicted RBP21.64■■□□□ 1.05
HLA-DQB1-201ENST00000374943 RPAP1Q9BWH6 1393 aaPredicted RBP21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 GOLIM4O00461 696 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 TAF5LO75529 589 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ZKSCAN1P17029 563 aaPredicted RBP21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ATP2B3Q16720 1220 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 USPL1Q5W0Q7 1092 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CLEC17AQ6ZS10 378 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 PTF1AQ7RTS3 328 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CNNM1Q9NRU3 951 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 TRPC5Q9UL62 973 aaPredicted RBP21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CYP2E1P05181 493 aaPredicted RBP21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ADORA1P30542 326 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 MCMDC2Q4G0Z9 681 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ZNF512BQ96KM6 892 aaPredicted RBP21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 HELLSQ9NRZ9 838 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 HMG20BQ9P0W2 317 aa21.63■■□□□ 1.05
HLA-DQB1-201ENST00000374943 MROH5Q6ZUA9 1318 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 DDX11L8A8MPP1 907 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 TSGA10IPQ3SY00 556 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 TTC39AQ5SRH9 613 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 RNF20Q5VTR2 975 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 GBP4Q96PP9 640 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ZSWIM6Q9HCJ5 1215 aa21.62■■□□□ 1.05
HLA-DQB1-201ENST00000374943 SLC27A2O14975 620 aa21.61■■□□□ 1.05
HLA-DQB1-201ENST00000374943 HCLS1P14317 486 aaPredicted RBP21.61■■□□□ 1.05
HLA-DQB1-201ENST00000374943 KCNJ4P48050 445 aa21.61■■□□□ 1.05
HLA-DQB1-201ENST00000374943 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ZGPATQ8N5A5 531 aaKnown RBP21.61■■□□□ 1.05
HLA-DQB1-201ENST00000374943 LAMA4Q16363 1823 aa21.61■■□□□ 1.05
HLA-DQB1-201ENST00000374943 PDE8BO95263 885 aa21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CASTP20810 708 aaKnown RBP21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CCDC152Q4G0S7 254 aa21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ZMYM1Q5SVZ6 1142 aa21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 RPS6KA4O75676 772 aa21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 DEKP35659 375 aaKnown RBP21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 LRRFIP1Q32MZ4 808 aaKnown RBP21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 VPS53Q5VIR6 699 aa21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 JAKMIP1Q96N16 626 aaKnown RBP21.6■■□□□ 1.05
HLA-DQB1-201ENST00000374943 MYO5AQ9Y4I1 1855 aaKnown RBP21.59■■□□□ 1.05
HLA-DQB1-201ENST00000374943 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
HLA-DQB1-201ENST00000374943 SSFA2P28290 1259 aa21.59■■□□□ 1.05
HLA-DQB1-201ENST00000374943 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
HLA-DQB1-201ENST00000374943 RNF113AO15541 343 aaKnown RBP21.58■■□□□ 1.05
HLA-DQB1-201ENST00000374943 PSMA5P28066 241 aa21.58■■□□□ 1.05
HLA-DQB1-201ENST00000374943 AK2P54819 239 aa21.58■■□□□ 1.05
HLA-DQB1-201ENST00000374943 ADCK5Q3MIX3 580 aa21.58■■□□□ 1.05
HLA-DQB1-201ENST00000374943 NARFQ9UHQ1 456 aa21.58■■□□□ 1.05
HLA-DQB1-201ENST00000374943 CYP46A1Q9Y6A2 500 aa21.58■■□□□ 1.05
HLA-DQB1-201ENST00000374943 FGFR2P21802 821 aa21.57■■□□□ 1.04
HLA-DQB1-201ENST00000374943 PUM3Q15397 648 aaKnown RBP21.57■■□□□ 1.04
HLA-DQB1-201ENST00000374943 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
HLA-DQB1-201ENST00000374943 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
HLA-DQB1-201ENST00000374943 ZFYP08048 801 aaPredicted RBP21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 PTMSP20962 102 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 LIMCH1Q9UPQ0 1083 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 FAM177BA6PVY3 158 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 KRT32Q14532 448 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 GSE1Q14687 1217 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 SEPT12Q8IYM1 358 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 LPIN2Q92539 896 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 SEC62Q99442 399 aaKnown RBP21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 DSCC1Q9BVC3 393 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 ALDH8A1Q9H2A2 487 aaPredicted RBP21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 PDRG1Q9NUG6 133 aa21.56■■□□□ 1.04
HLA-DQB1-201ENST00000374943 UBR3Q6ZT12 1888 aa21.55■■□□□ 1.04
HLA-DQB1-201ENST00000374943 CHGBP05060 677 aa21.55■■□□□ 1.04
HLA-DQB1-201ENST00000374943 KCNQ4P56696 695 aa21.55■■□□□ 1.04
HLA-DQB1-201ENST00000374943 CCDC129Q6ZRS4 1044 aa21.55■■□□□ 1.04
HLA-DQB1-201ENST00000374943 ARID4AP29374 1257 aaPredicted RBP21.54■■□□□ 1.04
HLA-DQB1-201ENST00000374943 FKBP4Q02790 459 aaKnown RBP eCLIP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms