RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
PTPN20-204ENST00000374346 LUZP1Q86V48 1076 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 PROSER2Q86WR7 435 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-204ENST00000374346 DBNDD2Q9BQY9 259 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 AP5Z1O43299 807 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 ATL3Q6DD88 541 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 C19orf44Q9H6X5 657 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 CBX8Q9HC52 389 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 C1orf167Q5SNV9 1468 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 JAK2O60674 1132 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 ZNF165P49910 485 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 CABP4P57796 275 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 RESTQ13127 1097 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 NAA16Q6N069 864 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-204ENST00000374346 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
PTPN20-204ENST00000374346 LRP10Q7Z4F1 713 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
PTPN20-204ENST00000374346 PFKFB2O60825 505 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 NR1I2O75469 434 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-204ENST00000374346 LRRFIP1Q32MZ4 808 aaKnown RBP13.42□□□□□ -0.26
PTPN20-204ENST00000374346 KCNF1Q9H3M0 494 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 ATP5J2-PTCD1G3V325 749 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 PTCD1O75127 700 aaKnown RBP13.42□□□□□ -0.26
PTPN20-204ENST00000374346 SCRN1Q12765 414 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 C17orf53Q8N3J3 647 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-204ENST00000374346 TDRD7Q8NHU6 1098 aaKnown RBP13.42□□□□□ -0.26
PTPN20-204ENST00000374346 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 DDX11Q96FC9 970 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 ZNF396Q96N95 335 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-204ENST00000374346 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 PAG1Q9NWQ8 432 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 MYH15Q9Y2K3 1946 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 MEGF6O75095 1541 aa13.42□□□□□ -0.26
PTPN20-204ENST00000374346 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-204ENST00000374346 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-204ENST00000374346 LAMA4Q16363 1823 aa13.41□□□□□ -0.26
PTPN20-204ENST00000374346 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
PTPN20-204ENST00000374346 SEC62Q99442 399 aaKnown RBP13.41□□□□□ -0.26
PTPN20-204ENST00000374346 CCDC73Q6ZRK6 1079 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-204ENST00000374346 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 NDUFB9Q9Y6M9 179 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 GOLIM4O00461 696 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 ATF3P18847 181 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 PTGS1P23219 599 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 ZNF75DP51815 510 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 PLA2G4DQ86XP0 818 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 ZMYND15Q9H091 742 aa13.4□□□□□ -0.26
PTPN20-204ENST00000374346 SPEF2Q9C093 1822 aa13.4□□□□□ -0.27
PTPN20-204ENST00000374346 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.27
PTPN20-204ENST00000374346 H7C1W4 665 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-204ENST00000374346 CASP7P55210 303 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-204ENST00000374346 DNAJC25Q9H1X3 360 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 KINO60870 393 aaKnown RBP13.39□□□□□ -0.27
PTPN20-204ENST00000374346 CDC25BP30305 580 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 STX1AQ16623 288 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
PTPN20-204ENST00000374346 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
PTPN20-204ENST00000374346 CYP27B1O15528 508 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 ZNF274Q96GC6 653 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-204ENST00000374346 LRRC2Q9BYS8 371 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 AGXT2Q9BYV1 514 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 NEMFO60524 1076 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
PTPN20-204ENST00000374346 FOXO4P98177 505 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
PTPN20-204ENST00000374346 CTNNA3Q9UI47 895 aa13.38□□□□□ -0.27
PTPN20-204ENST00000374346 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-204ENST00000374346 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
PTPN20-204ENST00000374346 BECN2A8MW95 431 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 RNF113AO15541 343 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 HSPD1P10809 573 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 EXOSC10Q01780 885 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 CEBPZQ03701 1054 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 APOBRQ0VD83 1088 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 STOX1Q6ZVD7 989 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 COL18A1P39060 1754 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 PARP4Q9UKK3 1724 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 E7EWF7 191 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 EYA2O00167 538 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 DHX16O60231 1041 aaKnown RBP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 CIAO1O76071 339 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms