RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 TSPY3P0CV98 308 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 TSPY8P0CW00 308 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 PRKG1Q13976 671 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 MARCH10Q8NA82 808 aaPredicted RBP9.78□□□□□ -0.84
PTBP3-205ENST00000374257 CSADQ9Y600 493 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
PTBP3-205ENST00000374257 PPP1R12BO60237 982 aaPredicted RBP9.78□□□□□ -0.84
PTBP3-205ENST00000374257 GTF2IP78347 998 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 USP48Q86UV5 1035 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 ANKRD44Q8N8A2 993 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 GNAT2P19087 354 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 ARHGEF6Q15052 776 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 RABEP1Q15276 862 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 JAKMIP1Q96N16 626 aaKnown RBP9.78□□□□□ -0.84
PTBP3-205ENST00000374257 TMOD4Q9NZQ9 345 aa9.78□□□□□ -0.84
PTBP3-205ENST00000374257 CTSWP56202 376 aa9.77□□□□□ -0.84
PTBP3-205ENST00000374257 SLC4A8Q2Y0W8 1093 aa9.77□□□□□ -0.84
PTBP3-205ENST00000374257 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.84
PTBP3-205ENST00000374257 ERFEQ4G0M1 354 aa9.77□□□□□ -0.84
PTBP3-205ENST00000374257 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.84
PTBP3-205ENST00000374257 ATG3Q9NT62 314 aa9.77□□□□□ -0.84
PTBP3-205ENST00000374257 CEP89Q96ST8 783 aa9.77□□□□□ -0.84
PTBP3-205ENST00000374257 ZC3H13Q5T200 1668 aaKnown RBP9.77□□□□□ -0.85
PTBP3-205ENST00000374257 TFCP2Q12800 502 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 OTUD7BQ6GQQ9 843 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 TAF5LO75529 589 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 HMGB1P09429 215 aaKnown RBP9.77□□□□□ -0.85
PTBP3-205ENST00000374257 GRIPAP1Q4V328 841 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 DCAF15Q66K64 600 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 SLC15A2Q16348 729 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 BICD2Q8TD16 824 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 SCLT1Q96NL6 688 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 NOP58Q9Y2X3 529 aaKnown RBP9.77□□□□□ -0.85
PTBP3-205ENST00000374257 XDHP47989 1333 aa9.77□□□□□ -0.85
PTBP3-205ENST00000374257 CCDC73Q6ZRK6 1079 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 MFSD14BQ5SR56 506 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 ILDR1Q86SU0 546 aaPredicted RBP9.76□□□□□ -0.85
PTBP3-205ENST00000374257 ANKRD20A12PQ8NF67 263 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 PPRC1Q5VV67 1664 aaKnown RBP9.76□□□□□ -0.85
PTBP3-205ENST00000374257 ESR2Q92731 530 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 VTI1AQ96AJ9 217 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 PIK3C2BO00750 1634 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 CEP152O94986 1710 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 NEURL1BA8MQ27 555 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 EZH2Q15910 746 aaKnown RBP9.76□□□□□ -0.85
PTBP3-205ENST00000374257 CCDC12Q8WUD4 166 aaPredicted RBP9.76□□□□□ -0.85
PTBP3-205ENST00000374257 RNF181Q9P0P0 153 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 KIF22Q14807 665 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 TTLL5Q6EMB2 1281 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 PRPF40BQ6NWY9 871 aaKnown RBP9.76□□□□□ -0.85
PTBP3-205ENST00000374257 JMYQ8N9B5 988 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
PTBP3-205ENST00000374257 PDRG1Q9NUG6 133 aa9.76□□□□□ -0.85
PTBP3-205ENST00000374257 PTPRUQ92729 1446 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 PAG1Q9NWQ8 432 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 TTF2Q9UNY4 1162 aaKnown RBP9.75□□□□□ -0.85
PTBP3-205ENST00000374257 MST1RQ04912 1400 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 LEMD3Q9Y2U8 911 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 A0A1B0GUL7 405 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 STK3Q13188 491 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 ZSCAN31Q96LW9 406 aaPredicted RBP9.75□□□□□ -0.85
PTBP3-205ENST00000374257 PLS1Q14651 629 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 CIAPIN1Q6FI81 312 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 ZNF594Q96JF6 807 aaPredicted RBP9.75□□□□□ -0.85
PTBP3-205ENST00000374257 KDM5AP29375 1690 aaKnown RBP9.75□□□□□ -0.85
PTBP3-205ENST00000374257 FER1L4A9Z1Z3 1794 aa9.75□□□□□ -0.85
PTBP3-205ENST00000374257 MIGA1Q8NAN2 632 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 C21orf2O43822 256 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 MAGEB6Q8N7X4 407 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 KRT23Q9C075 422 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 DLC1Q96QB1 1528 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 ABT1Q9ULW3 272 aaKnown RBP9.74□□□□□ -0.85
PTBP3-205ENST00000374257 CNNM2Q9H8M5 875 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
PTBP3-205ENST00000374257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.74□□□□□ -0.85
PTBP3-205ENST00000374257 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
PTBP3-205ENST00000374257 PPP4R3AQ6IN85 833 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 FRMPD1Q5SYB0 1578 aa9.74□□□□□ -0.85
PTBP3-205ENST00000374257 CDK12Q9NYV4 1490 aaPredicted RBP9.74□□□□□ -0.85
PTBP3-205ENST00000374257 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 SUCLG2Q96I99 432 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 DIP2AQ14689 1571 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 TIMM10P62072 90 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 ZNF396Q96N95 335 aaPredicted RBP9.73□□□□□ -0.85
PTBP3-205ENST00000374257 NCOA7Q8NI08 942 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 SMCR8Q8TEV9 937 aaPredicted RBP9.73□□□□□ -0.85
PTBP3-205ENST00000374257 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 VAT1LQ9HCJ6 419 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 TECPR2O15040 1411 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 IQCA1LA6NCM1 817 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 RNF113AO15541 343 aaKnown RBP9.73□□□□□ -0.85
PTBP3-205ENST00000374257 IBSPP21815 317 aaPredicted RBP9.73□□□□□ -0.85
PTBP3-205ENST00000374257 NUCB2P80303 420 aa9.73□□□□□ -0.85
PTBP3-205ENST00000374257 STK38Q15208 465 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms