RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ARHGAP29Q52LW3 1261 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 FAM177BA6PVY3 158 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 PPFIBP1Q86W92 1011 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 SECISBP2LQ93073 1101 aaKnown RBP7.61□□□□□ -1.19
CHD6-203ENST00000373233 ARHGEF25Q86VW2 580 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 USP25Q9UHP3 1055 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 PIK3C2AO00443 1686 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 NEMFO60524 1076 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 ALDH1L1O75891 902 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 ZKSCAN5Q9Y2L8 839 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 TNPO1Q92973 898 aaKnown RBP7.6□□□□□ -1.19
CHD6-203ENST00000373233 KIF1BPQ96EK5 621 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 CCDC181Q5TID7 509 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 BTG4Q9NY30 223 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 ABCC4O15439 1325 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 NOLC1Q14978 699 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD6-203ENST00000373233 VPS37DQ86XT2 251 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 POTEDQ86YR6 584 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 ANKRD44Q8N8A2 993 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 ZSCAN12O43309 604 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 SMC1AQ14683 1233 aaKnown RBP7.6□□□□□ -1.19
CHD6-203ENST00000373233 SPECC1LQ69YQ0 1117 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 SLC52A2Q9HAB3 445 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 KSR2Q6VAB6 950 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 G2E3Q7L622 706 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 PPP1R42Q7Z4L9 355 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 IL1RAPL2Q9NP60 686 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 SMTNL1A8MU46 457 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 WHAMMP3Q1A5X7 153 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 TTC39AQ5SRH9 613 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 C8orf37Q96NL8 207 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 SERPINC1P01008 464 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 CASQ1P31415 396 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 GIGYF2Q6Y7W6 1299 aaKnown RBP7.6□□□□□ -1.19
CHD6-203ENST00000373233 NCAPD2Q15021 1401 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 ATP2C2O75185 946 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 ADCY5O95622 1261 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 CCDC183Q5T5S1 534 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 TEX13AQ9BXU3 409 aaPredicted RBP7.6□□□□□ -1.19
CHD6-203ENST00000373233 ARFGAP3Q9NP61 516 aa7.6□□□□□ -1.19
CHD6-203ENST00000373233 ZNF853P0CG23 659 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 CWC25Q9NXE8 425 aaPredicted RBP7.59□□□□□ -1.19
CHD6-203ENST00000373233 CCDC57Q2TAC2 916 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 USP19O94966 1318 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 CEP128Q6ZU80 1094 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 IL17REQ8NFR9 667 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 CEP85Q6P2H3 762 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 CCDC148Q8NFR7 591 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 CNNM1Q9NRU3 951 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 TTC22Q5TAA0 569 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 BIRC2Q13490 618 aa7.59□□□□□ -1.19
CHD6-203ENST00000373233 KIF5BP33176 963 aa7.59□□□□□ -1.2
CHD6-203ENST00000373233 ZBTB3Q9H5J0 574 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 BUB1BO60566 1050 aaPredicted RBP7.58□□□□□ -1.2
CHD6-203ENST00000373233 SNW1Q13573 536 aaKnown RBP7.58□□□□□ -1.2
CHD6-203ENST00000373233 ANKRD13DQ6ZTN6 518 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 TXLNAP40222 546 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 BRINP3Q76B58 766 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 UBE3BQ7Z3V4 1068 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 NUP62CLQ9H1M0 184 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 ATP5J2-PTCD1G3V325 749 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 MAP3K11Q16584 847 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 BMP2KLQ5H9B9 411 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHD6-203ENST00000373233 MAP2K1Q02750 393 aaPredicted RBP7.58□□□□□ -1.2
CHD6-203ENST00000373233 TBC1D2Q9BYX2 928 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 NBPF11Q86T75 865 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 ANKS4BQ8N8V4 417 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 ZSCAN23Q3MJ62 389 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 RPUSD2Q8IZ73 545 aaKnown RBP7.58□□□□□ -1.2
CHD6-203ENST00000373233 MYRIPQ8NFW9 859 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 CCDC114Q96M63 670 aa7.58□□□□□ -1.2
CHD6-203ENST00000373233 RGPD2P0DJD1 1756 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 CPLX1O14810 134 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 TRIM4Q9C037 500 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 VPS18Q9P253 973 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 DCCP43146 1447 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 PIP4K2AP48426 406 aaPredicted RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 ZNF790Q6PG37 636 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 ZNF652Q9Y2D9 606 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 EIF4A1P60842 406 aaKnown RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 ATP8B2P98198 1209 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 ZNF365Q70YC5 407 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 CCDC85AQ96PX6 553 aaPredicted RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 CAVIN2O95810 425 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 SYNE3Q6ZMZ3 975 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 COPS6Q7L5N1 327 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 ZMAT2Q96NC0 199 aaKnown RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 A0A087WZG4 1122 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 KIF5CO60282 957 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 DAAM2Q86T65 1068 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 EFCC1Q9HA90 598 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 CCDC160A6NGH7 325 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 PEAK1Q9H792 1746 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 KIF3CO14782 793 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 KLHL40Q2TBA0 621 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 PHF23Q9BUL5 403 aaPredicted RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 KDRP35968 1356 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms