RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TMEM87AQ8NBN3 555 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 ESYT1Q9BSJ8 1104 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 METTL22Q9BUU2 404 aaPredicted RBP16.99■□□□□ 0.31
NDC1-201ENST00000371429 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 ITGA6P23229 1130 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
NDC1-201ENST00000371429 NMIQ13287 307 aaPredicted RBP16.99■□□□□ 0.31
NDC1-201ENST00000371429 CTAGE5O15320 804 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 SSFA2P28290 1259 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 RBM25P49756 843 aaKnown RBP16.98■□□□□ 0.31
NDC1-201ENST00000371429 ARHGAP29Q52LW3 1261 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 STXBP4Q6ZWJ1 553 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 G2E3Q7L622 706 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 CCDC150Q8NCX0 1101 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
NDC1-201ENST00000371429 PDE8AO60658 829 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 TNNI2P48788 182 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 EYA2O00167 538 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 CETN1Q12798 172 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 TAF4BQ92750 862 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 TNNQ9UQP3 1299 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 VPS36Q86VN1 386 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 PYM1Q9BRP8 204 aaKnown RBP16.97■□□□□ 0.31
NDC1-201ENST00000371429 ALG1Q9BT22 464 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 ZNF771Q7L3S4 317 aaPredicted RBP16.97■□□□□ 0.31
NDC1-201ENST00000371429 CKAP2LQ8IYA6 745 aa16.97■□□□□ 0.31
NDC1-201ENST00000371429 H0YIN7 160 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 NEFHP12036 1026 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 CETN2P41208 172 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
NDC1-201ENST00000371429 TMEM94Q12767 1356 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 PRC1O43663 620 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 PLS1Q14651 629 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 TCERG1LQ5VWI1 586 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 SMARCC2Q8TAQ2 1214 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 GGA1Q9UJY5 639 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 HIBADHP31937 336 aaKnown RBP16.96■□□□□ 0.31
NDC1-201ENST00000371429 SYCP3Q8IZU3 236 aa16.96■□□□□ 0.31
NDC1-201ENST00000371429 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
NDC1-201ENST00000371429 NAPAP54920 295 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 SPA17Q15506 151 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 RLBP1P12271 317 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 SFPQP23246 707 aaKnown RBP eCLIP16.95■□□□□ 0.3
NDC1-201ENST00000371429 TIMM10P62072 90 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 CHL1O00533 1208 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 Q6ZUG5 572 aa16.95■□□□□ 0.3
NDC1-201ENST00000371429 LRRC27Q9C0I9 530 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
NDC1-201ENST00000371429 TBCAO75347 108 aaKnown RBP16.94■□□□□ 0.3
NDC1-201ENST00000371429 ENOX2Q16206 610 aaKnown RBP16.94■□□□□ 0.3
NDC1-201ENST00000371429 B4DLN1 442 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
NDC1-201ENST00000371429 CCDC40Q4G0X9 1142 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 A0A1B0GUL7 405 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 BIN1O00499 593 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 BMP15O95972 392 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 CALM1P0DP23 149 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 CALM2P0DP24 149 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 CALM3P0DP25 149 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 MTIF2P46199 727 aaKnown RBP16.94■□□□□ 0.3
NDC1-201ENST00000371429 ANAPC15P60006 121 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 TEX11Q8IYF3 940 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
NDC1-201ENST00000371429 PUM3Q15397 648 aaKnown RBP16.93■□□□□ 0.3
NDC1-201ENST00000371429 DPP8Q6V1X1 898 aaPredicted RBP16.93■□□□□ 0.3
NDC1-201ENST00000371429 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
NDC1-201ENST00000371429 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
NDC1-201ENST00000371429 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
NDC1-201ENST00000371429 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
NDC1-201ENST00000371429 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
NDC1-201ENST00000371429 RBM27Q9P2N5 1060 aaKnown RBP16.93■□□□□ 0.3
NDC1-201ENST00000371429 KANK3Q6NY19 840 aa16.93■□□□□ 0.3
NDC1-201ENST00000371429 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
NDC1-201ENST00000371429 TNPO1Q92973 898 aaKnown RBP16.92■□□□□ 0.3
NDC1-201ENST00000371429 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
NDC1-201ENST00000371429 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
NDC1-201ENST00000371429 TOP1P11387 765 aaKnown RBP16.92■□□□□ 0.3
NDC1-201ENST00000371429 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
NDC1-201ENST00000371429 AXDND1Q5T1B0 1012 aaPredicted RBP16.92■□□□□ 0.3
NDC1-201ENST00000371429 C6orf50Q9HD87 102 aa16.92■□□□□ 0.3
NDC1-201ENST00000371429 MBD4O95243 580 aa16.92■□□□□ 0.3
NDC1-201ENST00000371429 SPDYE3A6NKU9 549 aa16.91■□□□□ 0.3
NDC1-201ENST00000371429 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
NDC1-201ENST00000371429 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
NDC1-201ENST00000371429 RRP36Q96EU6 259 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms