RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 KDM5BQ9UGL1 1544 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 Q6ZUG5 572 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 HOMER2Q9NSB8 354 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 SERPINA10Q9UK55 444 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 ARID5AQ03989 594 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 TTC22Q5TAA0 569 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 ZKSCAN3Q9BRR0 538 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 ZNF608Q9ULD9 1512 aaPredicted RBP9.79□□□□□ -0.84
ABCA4-201ENST00000370225 AKAP4Q5JQC9 854 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 OTUD6BQ8N6M0 293 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 EIF6P56537 245 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 JADE2Q9NQC1 790 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 MTERF4Q7Z6M4 381 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 ZYXQ15942 572 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 ALS2CR12Q96Q35 445 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 SPDYE3A6NKU9 549 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 IGHDP01880 384 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 PAFAH1B1P43034 410 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 EIF4A2Q14240 407 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 STX1AQ16623 288 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 MTHFSDQ2M296 383 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 C8orf58Q8NAV2 365 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 TNPO1Q92973 898 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 C16orf45Q96MC5 204 aaPredicted RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 PUS7Q96PZ0 661 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 ZSWIM4Q9H7M6 989 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 TBC1D5Q92609 795 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 TNNI2P48788 182 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 SPECC1Q5M775 1068 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 FAM114A1Q8IWE2 563 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 DDX17Q92841 729 aaKnown RBP9.78□□□□□ -0.84
ABCA4-201ENST00000370225 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
ABCA4-201ENST00000370225 RBM17Q96I25 401 aaKnown RBP9.77□□□□□ -0.84
ABCA4-201ENST00000370225 RIMS2Q9UQ26 1411 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 PDIA4P13667 645 aaKnown RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 TFCP2Q12800 502 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 INCENPQ9NQS7 918 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 LDHBP07195 334 aaKnown RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 MCMDC2Q4G0Z9 681 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 MCM7P33993 719 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 THOC2Q8NI27 1593 aaKnown RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 NMIQ13287 307 aaPredicted RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 KRT24Q2M2I5 525 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 CCDC102BQ68D86 513 aa9.77□□□□□ -0.85
ABCA4-201ENST00000370225 RRP36Q96EU6 259 aaKnown RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
ABCA4-201ENST00000370225 GCOM1H8Y6P7 765 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 CTAGE5O15320 804 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 MYZAPP0CAP1 466 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 SYKP43405 635 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 SSX2IPQ9Y2D8 614 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 TAF12Q16514 161 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 STAMBPO95630 424 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 NBPF7P0C2Y1 421 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 KRT13P13646 458 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 SDSP20132 328 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 PTGS1P23219 599 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 UIMC1Q96RL1 719 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 CCNL1Q9UK58 526 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 N4BP3O15049 544 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 POLR3GO15318 223 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 ASIC1P78348 528 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 RNF216Q9NWF9 866 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 HARSP12081 509 aaKnown RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 MAPK8IP2Q13387 824 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 CNNM2Q9H8M5 875 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 HMG20BQ9P0W2 317 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 BACH1O14867 736 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 UFL1O94874 794 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 NCBP1Q09161 790 aaKnown RBP9.76□□□□□ -0.85
ABCA4-201ENST00000370225 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 GIMAP6Q6P9H5 292 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 C6orf50Q9HD87 102 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
ABCA4-201ENST00000370225 MAATS1Q7Z4T9 603 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 KIF18AQ8NI77 898 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 DHX58Q96C10 678 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 SMC1AQ14683 1233 aaKnown RBP9.75□□□□□ -0.85
ABCA4-201ENST00000370225 STK32BQ9NY57 414 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 CNPY2Q9Y2B0 182 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 CNBD1Q8NA66 436 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 FERMT1Q9BQL6 677 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 TAOK3Q9H2K8 898 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 ASXL2Q76L83 1435 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 EEF2P13639 858 aaKnown RBP9.75□□□□□ -0.85
ABCA4-201ENST00000370225 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
ABCA4-201ENST00000370225 BICC1Q9H694 974 aaKnown RBP9.75□□□□□ -0.85
ABCA4-201ENST00000370225 ACTN2P35609 894 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 IL15P40933 162 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms