RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 STAP2Q9UGK3 403 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■■■□□ 15.9
PRPF38B-201ENST00000370021 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 GSDMDP57764 484 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 TRIM66O15016 1216 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 CAPN2P17655 700 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 RXRAP19793 462 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 DPCR1Q3MIW9 517 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 ARFGAP3Q9NP61 516 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 DIP2CQ9Y2E4 1556 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 RHOXF2BP0C7M4 288 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 ST5P78524 1137 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 SSH3Q8TE77 659 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 RHOXF2Q9BQY4 288 aa12.09□□□□□ -0.47
PRPF38B-201ENST00000370021 PNMA6AP0CW24 399 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 EAF2Q96CJ1 260 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 GDAP1L1Q96MZ0 367 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 KIF2AO00139 706 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 GOLIM4O00461 696 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 ZSCAN26Q16670 478 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 HIP1O00291 1037 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 ATP1A3P13637 1013 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 C8orf76Q96K31 380 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 PPP1R13BQ96KQ4 1090 aa12.08□□□□□ -0.48
PRPF38B-201ENST00000370021 CTAGE5O15320 804 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 KIF4BQ2VIQ3 1234 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 ERC1Q8IUD2 1116 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 TMEM131LA2VDJ0 1609 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 MED14O60244 1454 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 TTC21BQ7Z4L5 1316 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 RASSF4Q9H2L5 321 aa12.07□□□□□ -0.48
PRPF38B-201ENST00000370021 PREX1Q8TCU6 1659 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 ADKP55263 362 aaKnown RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 AXDND1Q5T1B0 1012 aaPredicted RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 RALYLQ86SE5 291 aaKnown RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 CD163L1Q9NR16 1453 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 FAM160A1Q05DH4 1040 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 RAD51AP2Q09MP3 1159 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 SMARCE1Q969G3 411 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 GOLPH3LQ9H4A5 285 aa12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 ZSCAN16Q9H4T2 348 aaPredicted RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 BICC1Q9H694 974 aaKnown RBP12.06□□□□□ -0.48
PRPF38B-201ENST00000370021 NDUFA8P51970 172 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 GTF2A1P52655 376 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 FANCCQ00597 558 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 NECTIN1Q15223 517 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 TXLNBQ8N3L3 684 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 MYD88Q99836 296 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 ZFYVE9O95405 1425 aa12.05□□□□□ -0.48
PRPF38B-201ENST00000370021 ETF1P62495 437 aaKnown RBP12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 ST3GAL1Q11201 340 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 KRT32Q14532 448 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 DRC1Q96MC2 740 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 DDX58O95786 925 aaKnown RBP12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 SCRN1Q12765 414 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 SLC39A6Q13433 755 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 NOM1Q5C9Z4 860 aaKnown RBP12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 CCDC150Q8NCX0 1101 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 MTX1Q13505 466 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 LONRF3Q496Y0 759 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 PTPRMP28827 1452 aa12.04□□□□□ -0.48
PRPF38B-201ENST00000370021 STX17P56962 302 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 TAF7LQ5H9L4 462 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 E4F1Q66K89 784 aaPredicted RBP12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms