RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
LRIF1-201ENST00000369763 FKBP4Q02790 459 aaKnown RBP eCLIP12.84□□□□□ -0.35
LRIF1-201ENST00000369763 BECN2A8MW95 431 aa12.84□□□□□ -0.35
LRIF1-201ENST00000369763 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
LRIF1-201ENST00000369763 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
LRIF1-201ENST00000369763 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
LRIF1-201ENST00000369763 BIN1O00499 593 aa12.83□□□□□ -0.35
LRIF1-201ENST00000369763 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.35
LRIF1-201ENST00000369763 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.35
LRIF1-201ENST00000369763 CACTINQ8WUQ7 758 aaKnown RBP12.83□□□□□ -0.35
LRIF1-201ENST00000369763 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.35
LRIF1-201ENST00000369763 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.35
LRIF1-201ENST00000369763 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
LRIF1-201ENST00000369763 CCDC94Q9BW85 323 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-201ENST00000369763 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
LRIF1-201ENST00000369763 TNNT1P13805 278 aa12.83□□□□□ -0.36
LRIF1-201ENST00000369763 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
LRIF1-201ENST00000369763 NPHP4O75161 1426 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-201ENST00000369763 ZNF75DP51815 510 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 PTPDC1A2A3K4 754 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 USP27XA6NNY8 438 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
LRIF1-201ENST00000369763 GOLPH3LQ9H4A5 285 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 ANKLE2Q86XL3 938 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 KCNB2Q92953 911 aa12.82□□□□□ -0.36
LRIF1-201ENST00000369763 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 DDX19AQ9NUU7 478 aaKnown RBP12.81□□□□□ -0.36
LRIF1-201ENST00000369763 RESTQ13127 1097 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 WASHC4Q2M389 1173 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 ZNF609O15014 1411 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 SDF4Q9BRK5 362 aa12.81□□□□□ -0.36
LRIF1-201ENST00000369763 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
LRIF1-201ENST00000369763 TTLL7Q6ZT98 887 aa12.8□□□□□ -0.36
LRIF1-201ENST00000369763 FSIP1Q8NA03 581 aa12.8□□□□□ -0.36
LRIF1-201ENST00000369763 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
LRIF1-201ENST00000369763 CCDC73Q6ZRK6 1079 aa12.8□□□□□ -0.36
LRIF1-201ENST00000369763 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
LRIF1-201ENST00000369763 ATP5JP18859 108 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 RXRAP19793 462 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
LRIF1-201ENST00000369763 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 MTERF4Q7Z6M4 381 aaKnown RBP12.79□□□□□ -0.36
LRIF1-201ENST00000369763 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
LRIF1-201ENST00000369763 CTDNEP1O95476 244 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 A1BGP04217 495 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
LRIF1-201ENST00000369763 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 CABP4P57796 275 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
LRIF1-201ENST00000369763 PAG1Q9NWQ8 432 aa12.79□□□□□ -0.36
LRIF1-201ENST00000369763 ELP1O95163 1332 aa12.78□□□□□ -0.36
LRIF1-201ENST00000369763 KRT32Q14532 448 aa12.78□□□□□ -0.36
LRIF1-201ENST00000369763 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
LRIF1-201ENST00000369763 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
LRIF1-201ENST00000369763 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
LRIF1-201ENST00000369763 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
LRIF1-201ENST00000369763 PROSER2Q86WR7 435 aaPredicted RBP12.78□□□□□ -0.36
LRIF1-201ENST00000369763 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
LRIF1-201ENST00000369763 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
LRIF1-201ENST00000369763 IFIT1P09914 478 aaKnown RBP12.77□□□□□ -0.36
LRIF1-201ENST00000369763 SKILP12757 684 aa12.77□□□□□ -0.36
LRIF1-201ENST00000369763 PHKG2P15735 406 aa12.77□□□□□ -0.36
LRIF1-201ENST00000369763 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.36
LRIF1-201ENST00000369763 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.36
LRIF1-201ENST00000369763 COPRSQ9NQ92 184 aa12.77□□□□□ -0.36
LRIF1-201ENST00000369763 ERBB3P21860 1342 aa12.77□□□□□ -0.37
LRIF1-201ENST00000369763 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.37
LRIF1-201ENST00000369763 E7EWF7 191 aa12.77□□□□□ -0.37
LRIF1-201ENST00000369763 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
LRIF1-201ENST00000369763 CYP27B1O15528 508 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 SMC2O95347 1197 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 KBTBD3Q8NAB2 608 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 HSPD1P10809 573 aaKnown RBP12.76□□□□□ -0.37
LRIF1-201ENST00000369763 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
LRIF1-201ENST00000369763 PLA2G4DQ86XP0 818 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 HAUS7Q99871 368 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 PRDM4Q9UKN5 801 aa12.76□□□□□ -0.37
LRIF1-201ENST00000369763 TPM3P06753 285 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 NCBP1Q09161 790 aaKnown RBP12.75□□□□□ -0.37
LRIF1-201ENST00000369763 TDRD7Q8NHU6 1098 aaKnown RBP12.75□□□□□ -0.37
LRIF1-201ENST00000369763 CLIC4Q9Y696 253 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 CCDC69A6NI79 296 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 M0R2C6 588 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 ADORA1P30542 326 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 UTYO14607 1347 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 A0A1B0GUL7 405 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms