RNA–Protein interactions for RNA: ENST00000369483.5

IGSF3-202, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene IGSF3, Length 7,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-202ENST00000369483 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 KRT23Q9C075 422 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 CPA1P15085 419 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 SYCP3Q8IZU3 236 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 ESR2Q92731 530 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 ERLIN2O94905 339 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 ITGA6P23229 1130 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 PRC1O43663 620 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
IGSF3-202ENST00000369483 LTKP29376 864 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 GIMAP6Q6P9H5 292 aa13.75□□□□□ -0.21
IGSF3-202ENST00000369483 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
IGSF3-202ENST00000369483 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 POLD1P28340 1107 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 TDRD12Q587J7 1177 aaKnown RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 CCDC12Q8WUD4 166 aaPredicted RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 UQCRHLA0A096LP55 91 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 UQCRHP07919 91 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 UBA7P41226 1012 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 ZGPATQ8N5A5 531 aaKnown RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 CALM1P0DP23 149 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 CALM2P0DP24 149 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 CALM3P0DP25 149 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
IGSF3-202ENST00000369483 CNBD1Q8NA66 436 aa13.74□□□□□ -0.21
IGSF3-202ENST00000369483 SPA17Q15506 151 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 NAPAP54920 295 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 USP21Q9UK80 565 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 MACROD2A1Z1Q3 448 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
IGSF3-202ENST00000369483 UFL1O94874 794 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
IGSF3-202ENST00000369483 TAF4BQ92750 862 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 BICD1Q96G01 975 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 PUF60Q9UHX1 559 aaKnown RBP13.73□□□□□ -0.21
IGSF3-202ENST00000369483 ZBTB21Q9ULJ3 1066 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.21
IGSF3-202ENST00000369483 CCDC40Q4G0X9 1142 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
IGSF3-202ENST00000369483 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
IGSF3-202ENST00000369483 SP4Q02446 784 aa13.72□□□□□ -0.21
IGSF3-202ENST00000369483 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
IGSF3-202ENST00000369483 PLIN2Q99541 437 aa13.72□□□□□ -0.21
IGSF3-202ENST00000369483 ZFYP08048 801 aaPredicted RBP13.72□□□□□ -0.21
IGSF3-202ENST00000369483 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
IGSF3-202ENST00000369483 GOLGA6L10A6NI86 522 aa13.72□□□□□ -0.21
IGSF3-202ENST00000369483 CA8P35219 290 aa13.72□□□□□ -0.21
IGSF3-202ENST00000369483 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 CCDC178Q5BJE1 867 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 JDP2Q8WYK2 163 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 MBD4O95243 580 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 USP19O94966 1318 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 TTC16Q8NEE8 873 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 CTNNBL1Q8WYA6 563 aaPredicted RBP13.71□□□□□ -0.21
IGSF3-202ENST00000369483 YEATS2Q9ULM3 1422 aa13.71□□□□□ -0.21
IGSF3-202ENST00000369483 ZSCAN22P10073 491 aaPredicted RBP13.71□□□□□ -0.22
IGSF3-202ENST00000369483 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 PRKG1Q13976 671 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 UIMC1Q96RL1 719 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 ARMT1Q9H993 441 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 PKD2L1Q9P0L9 805 aa13.71□□□□□ -0.22
IGSF3-202ENST00000369483 A0A1B0GUL7 405 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 KCNQ3O43525 872 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
IGSF3-202ENST00000369483 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 PLEKHM2Q8IWE5 1019 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
IGSF3-202ENST00000369483 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
IGSF3-202ENST00000369483 ZYXQ15942 572 aaKnown RBP13.7□□□□□ -0.22
IGSF3-202ENST00000369483 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 CASQ1P31415 396 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 AK2P54819 239 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 STAT6P42226 847 aa13.7□□□□□ -0.22
IGSF3-202ENST00000369483 SEC24BO95487 1268 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 MYO5CQ9NQX4 1742 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
IGSF3-202ENST00000369483 PDIA4P13667 645 aaKnown RBP13.69□□□□□ -0.22
IGSF3-202ENST00000369483 MCM7P33993 719 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 SYKP43405 635 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 H0YHG0 523 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 APBA3O96018 575 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 DESP17661 470 aa13.69□□□□□ -0.22
IGSF3-202ENST00000369483 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms