RNA–Protein interactions for RNA: ENST00000369214.2

PRDM13-201, Transcript of PR/SET domain 13, humanhuman

TSL 5

Gene PRDM13, Length 3,232 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-201ENST00000369214 SEC62Q99442 399 aaKnown RBP21.88■■□□□ 1.09
PRDM13-201ENST00000369214 LLPHQ9BRT6 129 aaKnown RBP21.88■■□□□ 1.09
PRDM13-201ENST00000369214 DNAJC2Q99543 621 aaKnown RBP21.88■■□□□ 1.09
PRDM13-201ENST00000369214 AXIN2Q9Y2T1 843 aa21.88■■□□□ 1.09
PRDM13-201ENST00000369214 CBX1P83916 185 aa21.87■■□□□ 1.09
PRDM13-201ENST00000369214 CHGBP05060 677 aa21.87■■□□□ 1.09
PRDM13-201ENST00000369214 C16orf45Q96MC5 204 aaPredicted RBP21.87■■□□□ 1.09
PRDM13-201ENST00000369214 HAUS7Q99871 368 aa21.87■■□□□ 1.09
PRDM13-201ENST00000369214 PFKFB2O60825 505 aa21.87■■□□□ 1.09
PRDM13-201ENST00000369214 ADD1P35611 737 aaKnown RBP21.87■■□□□ 1.09
PRDM13-201ENST00000369214 IQCB1Q15051 598 aa21.87■■□□□ 1.09
PRDM13-201ENST00000369214 CACTINQ8WUQ7 758 aaKnown RBP21.87■■□□□ 1.09
PRDM13-201ENST00000369214 SMTNL1A8MU46 457 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 ANKRD13DQ6ZTN6 518 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 DBNDD2Q9BQY9 259 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 RABL6Q3YEC7 729 aaPredicted RBP21.86■■□□□ 1.09
PRDM13-201ENST00000369214 NAA16Q6N069 864 aaPredicted RBP21.86■■□□□ 1.09
PRDM13-201ENST00000369214 SARM1Q6SZW1 724 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 LRRC2Q9BYS8 371 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 LAMA4Q16363 1823 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 SCN11AQ9UI33 1791 aa21.86■■□□□ 1.09
PRDM13-201ENST00000369214 CTAGE5O15320 804 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 TNNT1P13805 278 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 ZSCAN20P17040 1043 aaPredicted RBP21.85■■□□□ 1.09
PRDM13-201ENST00000369214 CCDC144BQ3MJ40 725 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 CCDC144CPQ8IYA2 1237 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 RCOR1Q9UKL0 485 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 GOLGA6L19H0YKK7 550 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 HMGB1P09429 215 aaKnown RBP21.85■■□□□ 1.09
PRDM13-201ENST00000369214 FGD1P98174 961 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 DMTNQ08495 405 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 AFDNP55196 1824 aaKnown RBP21.85■■□□□ 1.09
PRDM13-201ENST00000369214 CEBPZQ03701 1054 aaKnown RBP21.85■■□□□ 1.09
PRDM13-201ENST00000369214 UTP14CQ5TAP6 766 aaKnown RBP21.85■■□□□ 1.09
PRDM13-201ENST00000369214 STOX1Q6ZVD7 989 aa21.85■■□□□ 1.09
PRDM13-201ENST00000369214 NSUN7Q8NE18 718 aaKnown RBP21.85■■□□□ 1.09
PRDM13-201ENST00000369214 SYCP1Q15431 976 aa21.84■■□□□ 1.09
PRDM13-201ENST00000369214 LMOD2Q6P5Q4 547 aa21.84■■□□□ 1.09
PRDM13-201ENST00000369214 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
PRDM13-201ENST00000369214 CCAR1Q8IX12 1150 aaKnown RBP21.84■■□□□ 1.09
PRDM13-201ENST00000369214 RGPD5Q99666 1765 aa21.84■■□□□ 1.09
PRDM13-201ENST00000369214 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
PRDM13-201ENST00000369214 STX1AQ16623 288 aa21.84■■□□□ 1.09
PRDM13-201ENST00000369214 C11orf57Q6ZUT1 292 aaPredicted RBP21.84■■□□□ 1.09
PRDM13-201ENST00000369214 DHX32Q7L7V1 743 aaKnown RBP21.84■■□□□ 1.09
PRDM13-201ENST00000369214 KDM6AO15550 1401 aaPredicted RBP21.83■■□□□ 1.09
PRDM13-201ENST00000369214 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.09
PRDM13-201ENST00000369214 LRP10Q7Z4F1 713 aa21.83■■□□□ 1.09
PRDM13-201ENST00000369214 KBTBD3Q8NAB2 608 aa21.83■■□□□ 1.09
PRDM13-201ENST00000369214 ORAI2Q96SN7 254 aa21.83■■□□□ 1.09
PRDM13-201ENST00000369214 PAXBP1Q9Y5B6 917 aa21.83■■□□□ 1.09
PRDM13-201ENST00000369214 MRFAP1L1Q96HT8 127 aa21.83■■□□□ 1.08
PRDM13-201ENST00000369214 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.08
PRDM13-201ENST00000369214 NCBP1Q09161 790 aaKnown RBP21.82■■□□□ 1.08
PRDM13-201ENST00000369214 NFATC2IPQ8NCF5 419 aa21.82■■□□□ 1.08
PRDM13-201ENST00000369214 CTDNEP1O95476 244 aa21.82■■□□□ 1.08
PRDM13-201ENST00000369214 TPD52L1Q16890 204 aaPredicted RBP21.82■■□□□ 1.08
PRDM13-201ENST00000369214 ZNF496Q96IT1 587 aaPredicted RBP21.82■■□□□ 1.08
PRDM13-201ENST00000369214 PTPDC1A2A3K4 754 aa21.82■■□□□ 1.08
PRDM13-201ENST00000369214 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
PRDM13-201ENST00000369214 GOLPH3LQ9H4A5 285 aa21.82■■□□□ 1.08
PRDM13-201ENST00000369214 ATL3Q6DD88 541 aa21.81■■□□□ 1.08
PRDM13-201ENST00000369214 CCDC73Q6ZRK6 1079 aa21.81■■□□□ 1.08
PRDM13-201ENST00000369214 LRRC8AQ8IWT6 810 aa21.81■■□□□ 1.08
PRDM13-201ENST00000369214 FTOQ9C0B1 505 aaKnown RBP eCLIP21.81■■□□□ 1.08
PRDM13-201ENST00000369214 ERBB3P21860 1342 aa21.81■■□□□ 1.08
PRDM13-201ENST00000369214 NEMFO60524 1076 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 FOSBP53539 338 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 APOBRQ0VD83 1088 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 SNW1Q13573 536 aaKnown RBP21.8■■□□□ 1.08
PRDM13-201ENST00000369214 RAPGEF4Q8WZA2 1011 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 USP16Q9Y5T5 823 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 PALLDQ8WX93 1383 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 U2AF2P26368 475 aaKnown RBP eCLIP21.8■■□□□ 1.08
PRDM13-201ENST00000369214 ZNF396Q96N95 335 aaPredicted RBP21.8■■□□□ 1.08
PRDM13-201ENST00000369214 USP28Q96RU2 1077 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 AGXT2Q9BYV1 514 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
PRDM13-201ENST00000369214 HELLSQ9NRZ9 838 aa21.8■■□□□ 1.08
PRDM13-201ENST00000369214 A0A087WZG4 1122 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 SPDYE4A6NLX3 237 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 DSCC1Q9BVC3 393 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 ARFGEF2Q9Y6D5 1785 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
PRDM13-201ENST00000369214 PHKG2P15735 406 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 CCDC112Q8NEF3 446 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 ENGASEQ8NFI3 743 aa21.79■■□□□ 1.08
PRDM13-201ENST00000369214 KINO60870 393 aaKnown RBP21.78■■□□□ 1.08
PRDM13-201ENST00000369214 PIP4K2AP48426 406 aaPredicted RBP21.78■■□□□ 1.08
PRDM13-201ENST00000369214 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
PRDM13-201ENST00000369214 BECN2A8MW95 431 aa21.78■■□□□ 1.08
PRDM13-201ENST00000369214 FAM160A1Q05DH4 1040 aa21.78■■□□□ 1.08
PRDM13-201ENST00000369214 ANO10Q9NW15 660 aa21.78■■□□□ 1.08
PRDM13-201ENST00000369214 TRPM3Q9HCF6 1732 aaPredicted RBP21.78■■□□□ 1.08
PRDM13-201ENST00000369214 ATP5J2-PTCD1G3V325 749 aa21.78■■□□□ 1.08
PRDM13-201ENST00000369214 PTCD1O75127 700 aaKnown RBP21.78■■□□□ 1.08
PRDM13-201ENST00000369214 CASP7P55210 303 aa21.78■■□□□ 1.08
PRDM13-201ENST00000369214 GTPBP4Q9BZE4 634 aaKnown RBP21.78■■□□□ 1.08
PRDM13-201ENST00000369214 SALL1Q9NSC2 1324 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms