RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 BCL2L13Q9BXK5 485 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
SNX27-201ENST00000368838 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
SNX27-201ENST00000368838 IQCA1LA6NCM1 817 aa11.05□□□□□ -0.64
SNX27-201ENST00000368838 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
SNX27-201ENST00000368838 EPHX2P34913 555 aa11.05□□□□□ -0.64
SNX27-201ENST00000368838 CCT4P50991 539 aaKnown RBP11.05□□□□□ -0.64
SNX27-201ENST00000368838 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
SNX27-201ENST00000368838 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
SNX27-201ENST00000368838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNX27-201ENST00000368838 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNX27-201ENST00000368838 HYPKQ9NX55 129 aa11.05□□□□□ -0.64
SNX27-201ENST00000368838 HACL1Q9UJ83 578 aa11.05□□□□□ -0.64
SNX27-201ENST00000368838 PPEF1O14829 653 aaPredicted RBP11.04□□□□□ -0.64
SNX27-201ENST00000368838 FLIIQ13045 1269 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
SNX27-201ENST00000368838 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 LDHDQ86WU2 507 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 TMEM57Q8N5G2 664 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 XAGE3Q8WTP9 111 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 JDP2Q8WYK2 163 aa11.04□□□□□ -0.64
SNX27-201ENST00000368838 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
SNX27-201ENST00000368838 COL4A1P02462 1669 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 FZD9O00144 591 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 HCLS1P14317 486 aaPredicted RBP11.03□□□□□ -0.64
SNX27-201ENST00000368838 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
SNX27-201ENST00000368838 FMR1Q06787 632 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX27-201ENST00000368838 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
SNX27-201ENST00000368838 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
SNX27-201ENST00000368838 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
SNX27-201ENST00000368838 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
SNX27-201ENST00000368838 NLRP3Q96P20 1036 aa11.02□□□□□ -0.65
SNX27-201ENST00000368838 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
SNX27-201ENST00000368838 PSMD1Q99460 953 aa11.02□□□□□ -0.65
SNX27-201ENST00000368838 UTP14AQ9BVJ6 771 aaKnown RBP11.02□□□□□ -0.65
SNX27-201ENST00000368838 LRRC37AA6NMS7 1700 aa11.01□□□□□ -0.65
SNX27-201ENST00000368838 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
SNX27-201ENST00000368838 AOC3Q16853 763 aa11.01□□□□□ -0.65
SNX27-201ENST00000368838 PARP10Q53GL7 1025 aa11.01□□□□□ -0.65
SNX27-201ENST00000368838 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
SNX27-201ENST00000368838 RPAP2Q8IXW5 612 aaPredicted RBP11.01□□□□□ -0.65
SNX27-201ENST00000368838 GPC2Q8N158 579 aa11.01□□□□□ -0.65
SNX27-201ENST00000368838 RWDD1Q9H446 243 aaPredicted RBP11.01□□□□□ -0.65
SNX27-201ENST00000368838 CHPF2Q9P2E5 772 aa11.01□□□□□ -0.65
SNX27-201ENST00000368838 CNTNAP1P78357 1384 aa11□□□□□ -0.65
SNX27-201ENST00000368838 PITPNM1O00562 1244 aa11□□□□□ -0.65
SNX27-201ENST00000368838 PPIP5K2O43314 1243 aa11□□□□□ -0.65
SNX27-201ENST00000368838 ALDH1L1O75891 902 aa11□□□□□ -0.65
SNX27-201ENST00000368838 EPS15P42566 896 aa11□□□□□ -0.65
SNX27-201ENST00000368838 VEGFBP49765 207 aa11□□□□□ -0.65
SNX27-201ENST00000368838 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
SNX27-201ENST00000368838 CC2D2BQ6DHV5 1058 aa11□□□□□ -0.65
SNX27-201ENST00000368838 SMC5Q8IY18 1101 aa11□□□□□ -0.65
SNX27-201ENST00000368838 CNTROBQ8N137 903 aa11□□□□□ -0.65
SNX27-201ENST00000368838 TRMT112Q9UI30 125 aaKnown RBP11□□□□□ -0.65
SNX27-201ENST00000368838 HDAC5Q9UQL6 1122 aa11□□□□□ -0.65
SNX27-201ENST00000368838 TNNQ9UQP3 1299 aa11□□□□□ -0.65
SNX27-201ENST00000368838 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
SNX27-201ENST00000368838 SCN9AQ15858 1988 aa11□□□□□ -0.65
SNX27-201ENST00000368838 MYH3P11055 1940 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 TMEM88BA6NKF7 163 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 LMOD1P29536 600 aaPredicted RBP10.99□□□□□ -0.65
SNX27-201ENST00000368838 SCNN1DP51172 638 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 GRM1Q13255 1194 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 KSR2Q6VAB6 950 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 NIM1KQ8IY84 436 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 ATP6V0A2Q9Y487 856 aa10.99□□□□□ -0.65
SNX27-201ENST00000368838 TRAF5O00463 557 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 FOXN1O15353 648 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 DDX58O95786 925 aaKnown RBP10.98□□□□□ -0.65
SNX27-201ENST00000368838 GNAI3P08754 354 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 TCIRG1Q13488 830 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 G2E3Q7L622 706 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 PNMA8AQ86V59 439 aaPredicted RBP10.98□□□□□ -0.65
SNX27-201ENST00000368838 TMX4Q9H1E5 349 aaPredicted RBP10.98□□□□□ -0.65
SNX27-201ENST00000368838 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
SNX27-201ENST00000368838 PCDHB8Q9UN66 801 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
SNX27-201ENST00000368838 UTYO14607 1347 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 CASP8AP2Q9UKL3 1982 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
SNX27-201ENST00000368838 HSP90AB3PQ58FF7 597 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 BEND3Q5T5X7 828 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 DPP8Q6V1X1 898 aaPredicted RBP10.97□□□□□ -0.65
SNX27-201ENST00000368838 CHRDL2Q6WN34 429 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 MFRPQ9BY79 579 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms