RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 ATP5JP18859 108 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 PHKA1P46020 1223 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 NUCB2P80303 420 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 CDC5LQ99459 802 aaKnown RBP13.86□□□□□ -0.19
HPS1-204ENST00000361490 H3BQV1 296 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 BCAMP50895 628 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 CEBPZQ03701 1054 aaKnown RBP13.86□□□□□ -0.19
HPS1-204ENST00000361490 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 ISY1Q9ULR0 285 aaKnown RBP13.86□□□□□ -0.19
HPS1-204ENST00000361490 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 ATG9AQ7Z3C6 839 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 SNX21Q969T3 373 aa13.86□□□□□ -0.19
HPS1-204ENST00000361490 RFX5P48382 616 aaPredicted RBP13.85□□□□□ -0.19
HPS1-204ENST00000361490 VPS72Q15906 364 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 VPS53Q5VIR6 699 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 FIBPO43427 364 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
HPS1-204ENST00000361490 SCARF1Q14162 830 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 MSL1Q68DK7 614 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 RAD50Q92878 1312 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 GYG1P46976 350 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
HPS1-204ENST00000361490 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
HPS1-204ENST00000361490 UBN2Q6ZU65 1347 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 BRF1Q92994 677 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 NSFL1CQ9UNZ2 370 aaKnown RBP13.84□□□□□ -0.19
HPS1-204ENST00000361490 STRCQ7RTU9 1775 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
HPS1-204ENST00000361490 APBA3O96018 575 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
HPS1-204ENST00000361490 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 LSG1Q9H089 658 aaKnown RBP13.84□□□□□ -0.19
HPS1-204ENST00000361490 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 HSPA4P34932 840 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 TDO2P48775 406 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 MCM2P49736 904 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 GUCY1B3Q02153 619 aa13.84□□□□□ -0.19
HPS1-204ENST00000361490 CPLX1O14810 134 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 PARP10Q53GL7 1025 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 CAVIN4Q5BKX8 364 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
HPS1-204ENST00000361490 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 TMX4Q9H1E5 349 aaPredicted RBP13.83□□□□□ -0.2
HPS1-204ENST00000361490 AOX1Q06278 1338 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 SLC27A2O14975 620 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 MAGEB6Q8N7X4 407 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 RPGRQ92834 1020 aaKnown RBP13.83□□□□□ -0.2
HPS1-204ENST00000361490 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
HPS1-204ENST00000361490 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.83□□□□□ -0.2
HPS1-204ENST00000361490 BCL9O00512 1426 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
HPS1-204ENST00000361490 PDE8BO95263 885 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
HPS1-204ENST00000361490 LARP1BQ659C4 914 aaKnown RBP13.82□□□□□ -0.2
HPS1-204ENST00000361490 HAUS7Q99871 368 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 GNL3LQ9NVN8 582 aaKnown RBP13.82□□□□□ -0.2
HPS1-204ENST00000361490 KRT27Q7Z3Y8 459 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
HPS1-204ENST00000361490 CASP7P55210 303 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
HPS1-204ENST00000361490 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
HPS1-204ENST00000361490 UTYO14607 1347 aa13.81□□□□□ -0.2
HPS1-204ENST00000361490 SALL3Q9BXA9 1300 aa13.81□□□□□ -0.2
HPS1-204ENST00000361490 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
HPS1-204ENST00000361490 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
HPS1-204ENST00000361490 WTIPA6NIX2 430 aaPredicted RBP13.81□□□□□ -0.2
HPS1-204ENST00000361490 ZNF213O14771 459 aa13.81□□□□□ -0.2
HPS1-204ENST00000361490 CHRNDQ07001 517 aa13.81□□□□□ -0.2
HPS1-204ENST00000361490 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
HPS1-204ENST00000361490 BARGINQ6ZT62 677 aa13.81□□□□□ -0.2
HPS1-204ENST00000361490 CNBD1Q8NA66 436 aa13.81□□□□□ -0.2
HPS1-204ENST00000361490 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
HPS1-204ENST00000361490 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 Q6ZUG5 572 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
HPS1-204ENST00000361490 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 CAMTA2O94983 1202 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 RXRAP19793 462 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 COL15A1P39059 1388 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 NAPBQ9H115 298 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 GJB2P29033 226 aa13.8□□□□□ -0.2
HPS1-204ENST00000361490 ANAPC15P60006 121 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 CELF1Q92879 486 aaKnown RBP13.79□□□□□ -0.2
HPS1-204ENST00000361490 CYP7A1P22680 504 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 LPIN2Q92539 896 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms