RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 CCDC85AQ96PX6 553 aaPredicted RBP13.9□□□□□ -0.19
EPHB4-202ENST00000360620 ZSWIM4Q9H7M6 989 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 PRR36Q9H6K5 1346 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 CDKL5O76039 1030 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 TATP17735 454 aaPredicted RBP13.89□□□□□ -0.19
EPHB4-202ENST00000360620 SKIDA1Q1XH10 827 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 KCNH5Q8NCM2 988 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 KCNG4Q8TDN1 519 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 DACH1Q9UI36 760 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
EPHB4-202ENST00000360620 HSPA2P54652 639 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
EPHB4-202ENST00000360620 NDUFB9Q9Y6M9 179 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 ERLIN1O75477 346 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 SNRKQ9NRH2 765 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 MARCKSP29966 332 aaPredicted RBP13.88□□□□□ -0.19
EPHB4-202ENST00000360620 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
EPHB4-202ENST00000360620 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 EAF2Q96CJ1 260 aaPredicted RBP13.88□□□□□ -0.19
EPHB4-202ENST00000360620 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
EPHB4-202ENST00000360620 BABAM1Q9NWV8 329 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 ELP1O95163 1332 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 SIGLEC1Q9BZZ2 1709 aa13.88□□□□□ -0.19
EPHB4-202ENST00000360620 SYKP43405 635 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC70Q6NSX1 233 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 COPS6Q7L5N1 327 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 LRRC8AQ8IWT6 810 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 TTC14Q96N46 770 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 SPTLC2O15270 562 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 EIF3JO75822 258 aaKnown RBP13.87□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 BEND3Q5T5X7 828 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 SMARCE1Q969G3 411 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 PCMTD1Q96MG8 357 aaPredicted RBP13.87□□□□□ -0.19
EPHB4-202ENST00000360620 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
EPHB4-202ENST00000360620 TBC1D2BQ9UPU7 963 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
EPHB4-202ENST00000360620 SLC39A6Q13433 755 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 TRIM22Q8IYM9 498 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 MAP4K1Q92918 833 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC102AQ96A19 550 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 SUCLG2Q96I99 432 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■□ 20
EPHB4-202ENST00000360620 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
EPHB4-202ENST00000360620 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
EPHB4-202ENST00000360620 AKAP4Q5JQC9 854 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 IL25Q9H293 177 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 ADGRB1O14514 1584 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
EPHB4-202ENST00000360620 ROBO2Q9HCK4 1378 aa13.86□□□□□ -0.19
EPHB4-202ENST00000360620 KCNQ3O43525 872 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 HOXB7P09629 217 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
EPHB4-202ENST00000360620 CABP4P57796 275 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 ARFGAP3Q9NP61 516 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 A0A087WWV3 80 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 TFCP2Q12800 502 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 NAA30Q147X3 362 aaPredicted RBP13.85□□□□□ -0.19
EPHB4-202ENST00000360620 ERCC6LQ2NKX8 1250 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 CABLES1Q8TDN4 633 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 CPLX3Q8WVH0 158 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 MRFAP1L1Q96HT8 127 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
EPHB4-202ENST00000360620 ADGRB2O60241 1585 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 ZNF213O14771 459 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 LMAN1P49257 510 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 KCNF1Q9H3M0 494 aa13.85□□□□□ -0.19
EPHB4-202ENST00000360620 IDH1O75874 414 aaKnown RBP13.84□□□□□ -0.19
EPHB4-202ENST00000360620 JAKMIP3Q5VZ66 844 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 OTUD7BQ6GQQ9 843 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 ORAI2Q96SN7 254 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
EPHB4-202ENST00000360620 XBP1P17861 261 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 MICU3Q86XE3 530 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 DBNDD2Q9BQY9 259 aa13.84□□□□□ -0.19
EPHB4-202ENST00000360620 SRRTQ9BXP5 876 aaKnown RBP13.84□□□□□ -0.19
EPHB4-202ENST00000360620 GOLGA6L9A6NEM1 432 aa13.83□□□□□ -0.19
EPHB4-202ENST00000360620 KIF5CO60282 957 aa13.83□□□□□ -0.19
EPHB4-202ENST00000360620 TUBB4AP04350 444 aa13.83□□□□□ -0.19
EPHB4-202ENST00000360620 NECTIN1Q15223 517 aa13.83□□□□□ -0.19
EPHB4-202ENST00000360620 ATL3Q6DD88 541 aa13.83□□□□□ -0.19
EPHB4-202ENST00000360620 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.19
EPHB4-202ENST00000360620 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
EPHB4-202ENST00000360620 ZNF710Q8N1W2 664 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms