RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CCDC34Q96HJ3 373 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 PDRG1Q9NUG6 133 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 RPGRIP1LQ68CZ1 1315 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 A0A1W2PP64 1363 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 VPS37CA5D8V6 355 aaPredicted RBP8.91□□□□□ -0.98
CCR9-201ENST00000355983 SHOX2O60902 331 aaPredicted RBP8.91□□□□□ -0.98
CCR9-201ENST00000355983 URI1O94763 535 aaPredicted RBP8.91□□□□□ -0.98
CCR9-201ENST00000355983 ERLIN2O94905 339 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 TTLL5Q6EMB2 1281 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 CCDC83Q8IWF9 413 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 C8orf58Q8NAV2 365 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 PGBD1Q96JS3 809 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 VPS18Q9P253 973 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 CFAP45Q9UL16 551 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 L1RE1Q9UN81 338 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 AKAP2Q9Y2D5 859 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 HNRNPH1P31943 449 aaKnown RBP8.91□□□□□ -0.98
CCR9-201ENST00000355983 AARSP49588 968 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCR9-201ENST00000355983 SETQ01105 290 aaPredicted RBP8.91□□□□□ -0.98
CCR9-201ENST00000355983 ST3GAL1Q11201 340 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 ANKRD1Q15327 319 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 E2F4Q16254 413 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 CCDC30Q5VVM6 783 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 CYP46A1Q9Y6A2 500 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 MROH1Q8NDA8 1641 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 CACNA1FO60840 1977 aa8.91□□□□□ -0.98
CCR9-201ENST00000355983 SOS1Q07889 1333 aaPredicted RBP8.91□□□□□ -0.98
CCR9-201ENST00000355983 LARGE1O95461 756 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 PRKAR2BP31323 418 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 IRX1P78414 480 aaPredicted RBP8.9□□□□□ -0.98
CCR9-201ENST00000355983 GORABQ5T7V8 394 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 CTCFLQ8NI51 663 aaPredicted RBP8.9□□□□□ -0.98
CCR9-201ENST00000355983 BICD2Q8TD16 824 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 GNL3LQ9NVN8 582 aaKnown RBP8.9□□□□□ -0.98
CCR9-201ENST00000355983 KLHL33A6NCF5 533 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 PATL2C9JE40 543 aaKnown RBP8.9□□□□□ -0.98
CCR9-201ENST00000355983 EP400NLQ6ZTU2 488 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 CDC37L1Q7L3B6 337 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 PRPF38AQ8NAV1 312 aaKnown RBP8.9□□□□□ -0.98
CCR9-201ENST00000355983 MEIS3Q99687 375 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 PDE11AQ9HCR9 933 aa8.9□□□□□ -0.98
CCR9-201ENST00000355983 ARHGAP6O43182 974 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 GNAI2P04899 355 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 HSP90B2PQ58FF3 399 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
CCR9-201ENST00000355983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCR9-201ENST00000355983 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 CEP112Q8N8E3 955 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 ERCC4Q92889 916 aaPredicted RBP8.89□□□□□ -0.99
CCR9-201ENST00000355983 RILPL2Q969X0 211 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 RCOR1Q9UKL0 485 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 USP42Q9H9J4 1324 aaKnown RBP8.89□□□□□ -0.99
CCR9-201ENST00000355983 CAMSAP1Q5T5Y3 1602 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 A6NNZ2 444 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 GOLIM4O00461 696 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 IKBKBO14920 756 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 MNAT1P51948 309 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 ATP8B2P98198 1209 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 NEDD9Q14511 834 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 TUBB8Q3ZCM7 444 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 MIEF2Q96C03 454 aa8.89□□□□□ -0.99
CCR9-201ENST00000355983 VWA3AA6NCI4 1184 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 FYB1O15117 783 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 FANCGO15287 622 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 CBFA2T2O43439 604 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 RAB11FIP3O75154 756 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 FMNL3Q8IVF7 1028 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 CNNM3Q8NE01 707 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 ENGASEQ8NFI3 743 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 RUFY2Q8WXA3 655 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 FAN1Q9Y2M0 1017 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 PXDNLA1KZ92 1463 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 ANKRD33BA6NCL7 494 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 GPTP24298 496 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 MRPL12P52815 198 aaKnown RBP8.88□□□□□ -0.99
CCR9-201ENST00000355983 FAM160A1Q05DH4 1040 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 RESTQ13127 1097 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 ME3Q16798 604 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 KCNV1Q6PIU1 500 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 CCAR1Q8IX12 1150 aaKnown RBP8.88□□□□□ -0.99
CCR9-201ENST00000355983 AMOTL1Q8IY63 956 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 TERF2IPQ9NYB0 399 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 MCM8Q9UJA3 840 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 ABCC6O95255 1503 aa8.88□□□□□ -0.99
CCR9-201ENST00000355983 XRN1Q8IZH2 1706 aaKnown RBP8.88□□□□□ -0.99
CCR9-201ENST00000355983 PSMA5P28066 241 aa8.87□□□□□ -0.99
CCR9-201ENST00000355983 ZKSCAN8Q15776 578 aaPredicted RBP8.87□□□□□ -0.99
CCR9-201ENST00000355983 NBPF10Q6P3W6 841 aaKnown RBP8.87□□□□□ -0.99
CCR9-201ENST00000355983 GBP6Q6ZN66 633 aa8.87□□□□□ -0.99
CCR9-201ENST00000355983 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
CCR9-201ENST00000355983 AOPEPQ8N6M6 819 aa8.87□□□□□ -0.99
CCR9-201ENST00000355983 KAT2BQ92831 832 aa8.87□□□□□ -0.99
CCR9-201ENST00000355983 XAGE2Q96GT9 111 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms