RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 PTCH1Q13635 1447 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 SLC27A2O14975 620 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 GCKRQ14397 625 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 IMMTQ16891 758 aaKnown RBP16.34■□□□□ 0.21
SREBF1-202ENST00000355815 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 TTC41PQ6P2S7 1318 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 EIF3JO75822 258 aaKnown RBP16.34■□□□□ 0.21
SREBF1-202ENST00000355815 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
SREBF1-202ENST00000355815 IL25Q9H293 177 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 LARGE1O95461 756 aa16.33■□□□□ 0.21
SREBF1-202ENST00000355815 MICU3Q86XE3 530 aa16.33■□□□□ 0.21
SREBF1-202ENST00000355815 CPS1P31327 1500 aa16.33■□□□□ 0.21
SREBF1-202ENST00000355815 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.21
SREBF1-202ENST00000355815 LUZP1Q86V48 1076 aa16.33■□□□□ 0.21
SREBF1-202ENST00000355815 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
SREBF1-202ENST00000355815 ERLIN1O75477 346 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 CPLX3Q8WVH0 158 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 RIOK3O14730 519 aaKnown RBP16.33■□□□□ 0.2
SREBF1-202ENST00000355815 MCMDC2Q4G0Z9 681 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 CDC37L1Q7L3B6 337 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.2
SREBF1-202ENST00000355815 STARD3NLO95772 234 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 MCM6Q14566 821 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 AIDAQ96BJ3 306 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 LRP2BPQ9P2M1 347 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 IQSEC2Q5JU85 1478 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 TDO2P48775 406 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
SREBF1-202ENST00000355815 TMC6Q7Z403 805 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 SKILP12757 684 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 BMS1Q14692 1282 aaKnown RBP16.32■□□□□ 0.2
SREBF1-202ENST00000355815 ANO6Q4KMQ2 910 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
SREBF1-202ENST00000355815 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-202ENST00000355815 ZNF213O14771 459 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 CCP110O43303 1012 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 CHGBP05060 677 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 SNW1Q13573 536 aaKnown RBP16.31■□□□□ 0.2
SREBF1-202ENST00000355815 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■□□ 17.3
SREBF1-202ENST00000355815 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 PAG1Q9NWQ8 432 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 NEXMIFQ5QGS0 1516 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 CDR1P51861 262 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 PHACTR2O75167 634 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 TNNI3KQ59H18 835 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-202ENST00000355815 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-202ENST00000355815 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 FPGT-TNNI3KV9GXZ4 949 aa16.31■□□□□ 0.2
SREBF1-202ENST00000355815 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 DHX16O60231 1041 aaKnown RBP16.3■□□□□ 0.2
SREBF1-202ENST00000355815 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 OSBPL3Q9H4L5 887 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-202ENST00000355815 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 DNAI1Q9UI46 699 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 KLF18A0A0U1RQI7 1052 aa16.3■□□□□ 0.2
SREBF1-202ENST00000355815 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
SREBF1-202ENST00000355815 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 LIG1P18858 919 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 MROH2AA6NES4 1674 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-202ENST00000355815 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-202ENST00000355815 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 LSG1Q9H089 658 aaKnown RBP16.29■□□□□ 0.2
SREBF1-202ENST00000355815 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 A0A087WWV3 80 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 CALRP27797 417 aaKnown RBP16.29■□□□□ 0.2
SREBF1-202ENST00000355815 ZNF445P59923 1031 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 JAKMIP3Q5VZ66 844 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
SREBF1-202ENST00000355815 MNAT1P51948 309 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-202ENST00000355815 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
SREBF1-202ENST00000355815 SETBP1Q9Y6X0 1596 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 SASH1O94885 1247 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 FILIP1LQ4L180 1135 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
SREBF1-202ENST00000355815 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms