RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
TRAF3-202ENST00000351691 TPCN1Q9ULQ1 816 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 CWC27Q6UX04 472 aaKnown RBP17.48■□□□□ 0.39
TRAF3-202ENST00000351691 ORAI2Q96SN7 254 aa17.48■□□□□ 0.39
TRAF3-202ENST00000351691 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.48■□□□□ 0.393e-7■■■□□ 14.7
TRAF3-202ENST00000351691 C1orf141Q5JVX7 400 aa17.48■□□□□ 0.39
TRAF3-202ENST00000351691 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
TRAF3-202ENST00000351691 SRRTQ9BXP5 876 aaKnown RBP17.48■□□□□ 0.39
TRAF3-202ENST00000351691 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
TRAF3-202ENST00000351691 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 ARID5BQ14865 1188 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 ERCC6LQ2NKX8 1250 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
TRAF3-202ENST00000351691 CCDC150Q8NCX0 1101 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
TRAF3-202ENST00000351691 PTH1RQ03431 593 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
TRAF3-202ENST00000351691 ADAMTS7Q9UKP4 1686 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 ADCY9O60503 1353 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 CCP110O43303 1012 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 TMCO3Q6UWJ1 677 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
TRAF3-202ENST00000351691 CFAP45Q9UL16 551 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 MST1RQ04912 1400 aa17.46■□□□□ 0.39
TRAF3-202ENST00000351691 ZNF335Q9H4Z2 1342 aaPredicted RBP17.46■□□□□ 0.39
TRAF3-202ENST00000351691 GCP02774 474 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 GPS2Q13227 327 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
TRAF3-202ENST00000351691 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
TRAF3-202ENST00000351691 ANO10Q9NW15 660 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
TRAF3-202ENST00000351691 PHLPP2Q6ZVD8 1323 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 KIF1AQ12756 1690 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 MYH15Q9Y2K3 1946 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 BECN2A8MW95 431 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 DHX40Q8IX18 779 aaKnown RBP17.45■□□□□ 0.38
TRAF3-202ENST00000351691 PPP1R13BQ96KQ4 1090 aa17.45■□□□□ 0.38
TRAF3-202ENST00000351691 TFIP11Q9UBB9 837 aaKnown RBP17.45■□□□□ 0.38
TRAF3-202ENST00000351691 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
TRAF3-202ENST00000351691 NBPF7P0C2Y1 421 aaPredicted RBP17.44■□□□□ 0.38
TRAF3-202ENST00000351691 RESTQ13127 1097 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 E4F1Q66K89 784 aaPredicted RBP17.44■□□□□ 0.38
TRAF3-202ENST00000351691 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
TRAF3-202ENST00000351691 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 HIP1O00291 1037 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 KCNQ3O43525 872 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 NRDCO43847 1150 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 ARHGAP29Q52LW3 1261 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
TRAF3-202ENST00000351691 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
TRAF3-202ENST00000351691 MAP4K1Q92918 833 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
TRAF3-202ENST00000351691 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 YY1AP1Q9H869 796 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 PSD3Q9NYI0 1048 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 CWC15Q9P013 229 aaKnown RBP17.43■□□□□ 0.38
TRAF3-202ENST00000351691 C1orf167Q5SNV9 1468 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 NAT10Q9H0A0 1025 aaKnown RBP17.43■□□□□ 0.38
TRAF3-202ENST00000351691 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
TRAF3-202ENST00000351691 CEP57L1Q8IYX8 460 aa17.42■□□□□ 0.38
TRAF3-202ENST00000351691 PLCD3Q8N3E9 789 aa17.42■□□□□ 0.38
TRAF3-202ENST00000351691 UBXN4Q92575 508 aa17.42■□□□□ 0.38
TRAF3-202ENST00000351691 RBM8AQ9Y5S9 174 aaKnown RBP17.42■□□□□ 0.38
TRAF3-202ENST00000351691 TSGA10IPQ3SY00 556 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 BPIFA3Q9BQP9 254 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 PXDNQ92626 1479 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 EFCAB8A8MWE9 144 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
TRAF3-202ENST00000351691 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 SYT10Q6XYQ8 523 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 EVI5LQ96CN4 794 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
TRAF3-202ENST00000351691 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
TRAF3-202ENST00000351691 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
TRAF3-202ENST00000351691 ETF1P62495 437 aaKnown RBP17.4■□□□□ 0.38
TRAF3-202ENST00000351691 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
TRAF3-202ENST00000351691 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
TRAF3-202ENST00000351691 UTYO14607 1347 aa17.4■□□□□ 0.38
TRAF3-202ENST00000351691 SLC27A2O14975 620 aa17.4■□□□□ 0.38
TRAF3-202ENST00000351691 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms