RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 E4F1Q66K89 784 aaPredicted RBP17.68■□□□□ 0.42
PTBP1-201ENST00000349038 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
PTBP1-201ENST00000349038 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 PA2G4Q9UQ80 394 aaKnown RBP17.67■□□□□ 0.42
PTBP1-201ENST00000349038 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
PTBP1-201ENST00000349038 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 A0A1B0GVL5 298 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 LEKR1Q6ZMV7 388 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 RRP15Q9Y3B9 282 aaKnown RBP17.67■□□□□ 0.42
PTBP1-201ENST00000349038 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 SASH3O75995 380 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
PTBP1-201ENST00000349038 PUF60Q9UHX1 559 aaKnown RBP17.67■□□□□ 0.42
PTBP1-201ENST00000349038 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 GNG11P61952 73 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 NFATC2IPQ8NCF5 419 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 CCDC8Q9H0W5 538 aaPredicted RBP17.66■□□□□ 0.42
PTBP1-201ENST00000349038 ERBB3P21860 1342 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 LMTK3Q96Q04 1460 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 POLA2Q14181 598 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 KARSQ15046 597 aaKnown RBP17.66■□□□□ 0.42
PTBP1-201ENST00000349038 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 TSPYL1Q9H0U9 437 aa17.66■□□□□ 0.42
PTBP1-201ENST00000349038 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
PTBP1-201ENST00000349038 CEP57L1Q8IYX8 460 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 AK7Q96M32 723 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 BOLA2Q9H3K6 86 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 CWC15Q9P013 229 aaKnown RBP17.65■□□□□ 0.42
PTBP1-201ENST00000349038 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
PTBP1-201ENST00000349038 PPARDQ03181 441 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 GOLGA6L1Q8N7Z2 621 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 CRYBG1Q9Y4K1 1723 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 CASQ1P31415 396 aa17.65■□□□□ 0.42
PTBP1-201ENST00000349038 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
PTBP1-201ENST00000349038 STX1AQ16623 288 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 OTUD7BQ6GQQ9 843 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 HINFPQ9BQA5 517 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
PTBP1-201ENST00000349038 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
PTBP1-201ENST00000349038 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
PTBP1-201ENST00000349038 SBNO1A3KN83 1393 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 SERPINC1P01008 464 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 GDAP1L1Q96MZ0 367 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 FLT4P35916 1363 aa17.64■□□□□ 0.41
PTBP1-201ENST00000349038 PDCP20941 246 aa17.63■□□□□ 0.41
PTBP1-201ENST00000349038 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
PTBP1-201ENST00000349038 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 CREBRFQ8IUR6 639 aa17.63■□□□□ 0.41
PTBP1-201ENST00000349038 ADAM21Q9UKJ8 722 aa17.63■□□□□ 0.41
PTBP1-201ENST00000349038 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 POLR3DP05423 398 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 ORC3Q9UBD5 711 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 H2AFXP16104 143 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
PTBP1-201ENST00000349038 EYA1Q99502 592 aa17.63■□□□□ 0.41
PTBP1-201ENST00000349038 ARFGAP3Q9NP61 516 aa17.63■□□□□ 0.41
PTBP1-201ENST00000349038 IQCB1Q15051 598 aa17.62■□□□□ 0.41
PTBP1-201ENST00000349038 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
PTBP1-201ENST00000349038 CACNA1FO60840 1977 aa17.62■□□□□ 0.41
PTBP1-201ENST00000349038 CHGBP05060 677 aa17.62■□□□□ 0.41
PTBP1-201ENST00000349038 ATP1A3P13637 1013 aa17.62■□□□□ 0.41
PTBP1-201ENST00000349038 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
PTBP1-201ENST00000349038 NBPF7P0C2Y1 421 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-201ENST00000349038 DPCR1Q3MIW9 517 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 ARMCX5Q6P1M9 558 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 ZSCAN31Q96LW9 406 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-201ENST00000349038 DESI2Q9BSY9 194 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 GOLPH3LQ9H4A5 285 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
PTBP1-201ENST00000349038 N4BP1O75113 896 aaKnown RBP17.61■□□□□ 0.41
PTBP1-201ENST00000349038 FAM193AP78312 1265 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 PDE11AQ9HCR9 933 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 SH2B1Q9NRF2 756 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-201ENST00000349038 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-201ENST00000349038 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
PTBP1-201ENST00000349038 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
PTBP1-201ENST00000349038 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
PTBP1-201ENST00000349038 AACSQ86V21 672 aa17.6■□□□□ 0.41
PTBP1-201ENST00000349038 IRX2Q9BZI1 471 aaPredicted RBP17.6■□□□□ 0.41
PTBP1-201ENST00000349038 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
PTBP1-201ENST00000349038 ANO10Q9NW15 660 aa17.6■□□□□ 0.41
PTBP1-201ENST00000349038 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
PTBP1-201ENST00000349038 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
PTBP1-201ENST00000349038 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 HDAC5Q9UQL6 1122 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 TTC21AQ8NDW8 1320 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 NEMFO60524 1076 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 ETF1P62495 437 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms